4PK1
Structure of BamB fused to a BamA POTRA domain fragment
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF13360 | e4pk1A1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF13360 | ECOD (1.6) |
A | PF07244 | e4pk1A3 | A: a+b duplicates or obligate multimers | X: Polypeptide transport-associated (POTRA) domain (From Topology) | H: Polypeptide transport-associated (POTRA) domain (From Topology) | T: Polypeptide transport-associated (POTRA) domain | F: PF07244 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.20.310 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | membrane protein fhac | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13360 | PQQ-like domain (PQQ_2) | PQQ-like domain | - | Repeat | |
PF07244 | Surface antigen variable number repeat (POTRA) | Surface antigen variable number repeat | This family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by Pfam:PF01103. The alignment centres on a -GY- or -GF- motif. Some members ... | Domain | |
PF01011 | PQQ enzyme repeat (PQQ) | PQQ enzyme repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR018391 | Pyrrolo-quinoline quinone beta-propeller repeat | Repeat | |
IPR011047 | Quinoprotein alcohol dehydrogenase-like superfamily | Homologous Superfamily | |
IPR017687 | Outer membrane protein assembly factor BamB | Family | |
IPR002372 | Pyrrolo-quinoline quinone repeat | Repeat | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily | |
IPR039910 | Surface antigen D15-like | Family | |
IPR034746 | POTRA domain | Domain | |
IPR000184 | Bacterial surface antigen (D15) | Domain | |
IPR010827 | POTRA domain, BamA/TamA-like | Domain | |
IPR023707 | Outer membrane protein assembly factor BamA | Family |