4P1T

Crystal structure of the DBL3X-DBL4epsilon double domain from the extracellular part of VAR2CSA PfEMP1 from Plasmodium falciparum

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF05424e4p1tA3 A: alpha bundlesX: Duffy-binding-like domain, N-terminal subdomain (From Topology)H: Duffy-binding-like domain, N-terminal subdomain (From Topology)T: Duffy-binding-like domain, N-terminal subdomainF: PF05424ECOD (1.6)
AF_UNCLASSIFIEDe4p1tA4 A: alpha bundlesX: Duffy-binding-like domain, C-terminal subdomain (From Topology)H: Duffy-binding-like domain, C-terminal subdomain (From Topology)T: Duffy-binding-like domain, C-terminal subdomainF: F_UNCLASSIFIEDECOD (1.6)
APF22672e4p1tA2 A: alpha bundlesX: Duffy-binding-like domain, C-terminal subdomain (From Topology)H: Duffy-binding-like domain, C-terminal subdomain (From Topology)T: Duffy-binding-like domain, C-terminal subdomainF: PF22672ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF05424Duffy binding domain (Duffy_binding)Duffy binding domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Erythrocyte membrane protein 1 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR008602Duffy-antigen binding domainDomain
IPR044932Plasmodium falciparum erythrocyte membrane protein 1, acidic terminal segment superfamilyHomologous Superfamily
IPR042202Duffy-antigen binding superfamilyHomologous Superfamily
IPR032761Plasmodium falciparum erythrocyte membrane protein 1, N-terminalDomain
IPR029211Plasmodium falciparum erythrocyte membrane protein 1, acidic terminal segmentDomain