4ODA
Crystal structure of the vaccinia virus DNA polymerase holoenzyme subunit D4 in complex with the A20 N-terminus
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | F_UNCLASSIFIED | e4odaB1 | A: a/b three-layered sandwiches | X: Uracil-DNA glycosylase-like (From Topology) | H: Uracil-DNA glycosylase-like (From Topology) | T: Uracil-DNA glycosylase-like | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth A] | F_UNCLASSIFIED | e4odaA1 | A: a/b three-layered sandwiches | X: Uracil-DNA glycosylase-like (From Topology) | H: Uracil-DNA glycosylase-like (From Topology) | T: Uracil-DNA glycosylase-like | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 3.40.470.10 | Alpha Beta | 3-Layer(aba) Sandwich | Uracil-DNA Glycosylase, subunit E | Uracil-DNA glycosylase-like domain | CATH (4.3.0) |
C [auth A] | 3.40.470.10 | Alpha Beta | 3-Layer(aba) Sandwich | Uracil-DNA Glycosylase, subunit E | Uracil-DNA glycosylase-like domain | CATH (4.3.0) |
B [auth D] | 6.10.140.1880 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) | |
D [auth C] | 6.10.140.1880 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth D], D [auth C] | PF05941 | Chordopoxvirus A20R protein (Chordopox_A20R) | Chordopoxvirus A20R protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], C [auth A] | IPR018085 | Uracil-DNA glycosylase, active site | Active Site |
A [auth B], C [auth A] | IPR036895 | Uracil-DNA glycosylase-like domain superfamily | Homologous Superfamily |
B [auth D], D [auth C] | IPR010267 | Chordopoxvirus A20R | Family |