4M01
N terminal fragment(residues 245-575) of binding region of SraP
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Type 1 MUP repeat-like | 8095848 | 4006031 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | MUB repeats-like | 8095849 | 3002709 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | MUB repeats-like | 8095849 | 3002709 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | MUB repeats-like | 8095849 | 3002709 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | MUB repeats-like | 8095849 | 3002709 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF18483 | e4m01A1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF18483 | ECOD (1.6) |
A | F_UNCLASSIFIED | e4m01A2 | A: beta sandwiches | X: Mucin-binding protein domain (From Topology) | H: Mucin-binding protein domain (From Topology) | T: Mucin-binding protein domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF18483 | e4m01B1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF18483 | ECOD (1.6) |
B | F_UNCLASSIFIED | e4m01B2 | A: beta sandwiches | X: Mucin-binding protein domain (From Topology) | H: Mucin-binding protein domain (From Topology) | T: Mucin-binding protein domain | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF18483 | e4m01D1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF18483 | ECOD (1.6) |
D | F_UNCLASSIFIED | e4m01D2 | A: beta sandwiches | X: Mucin-binding protein domain (From Topology) | H: Mucin-binding protein domain (From Topology) | T: Mucin-binding protein domain | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF18483 | e4m01C1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: PF18483 | ECOD (1.6) |
C | F_UNCLASSIFIED | e4m01C2 | A: beta sandwiches | X: Mucin-binding protein domain (From Topology) | H: Mucin-binding protein domain (From Topology) | T: Mucin-binding protein domain | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
A | 3.10.20.320 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Putative peptidoglycan bound protein (lpxtg motif) | CATH (4.3.0) |
B | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
B | 3.10.20.320 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Putative peptidoglycan bound protein (lpxtg motif) | CATH (4.3.0) |
D | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
D | 3.10.20.320 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Putative peptidoglycan bound protein (lpxtg motif) | CATH (4.3.0) |
C | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
C | 3.10.20.320 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Putative peptidoglycan bound protein (lpxtg motif) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015919 | Cadherin-like superfamily | Homologous Superfamily | |
IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily | |
IPR022263 | KxYKxGKxW signal peptide | Conserved Site | |
IPR019931 | LPXTG cell wall anchor domain | Domain |