4LDM
Crystal Structure of an RNA-free VP40 Octameric Ring
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4ldma_ | All beta proteins | EV matrix protein | EV matrix protein | EV matrix protein | automated matches | ZEBOV (Zaire ebolavirus ) [TaxId: 186538 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | EV matrix protein-like | 8044506 | 3000219 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.70.20.20 | Mainly Beta | Distorted Sandwich | Topoisomerase I | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07447 | Matrix protein VP40 (VP40) | Matrix protein VP40 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR043079 | EV matrix protein, N-terminal | Homologous Superfamily | |
IPR008986 | EV matrix protein | Family | |
IPR038057 | EV matrix domain superfamily | Homologous Superfamily | |
IPR035092 | EV matrix protein, C-terminal | Homologous Superfamily |