4JC8
Crystal Structure of HOPS component Vps33 from Chaetomium thermophilum
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00995 | e4jc8A2 | A: alpha complex topology | X: alpha-helical domain in sec1/munc18-like (SM) proteins (From Topology) | H: alpha-helical domain in sec1/munc18-like (SM) proteins (From Topology) | T: alpha-helical domain in sec1/munc18-like (SM) proteins | F: PF00995 | ECOD (1.6) |
A | PF00995 | e4jc8A3 | A: a/b three-layered sandwiches | X: Rossmann-like domains in Sec1/munc18-like proteins (From Topology) | H: Rossmann-like domains in Sec1/munc18-like proteins (From Topology) | T: Rossmann-like domains in Sec1/munc18-like proteins | F: PF00995 | ECOD (1.6) |
B | PF00995 | e4jc8B1 | A: alpha complex topology | X: alpha-helical domain in sec1/munc18-like (SM) proteins (From Topology) | H: alpha-helical domain in sec1/munc18-like (SM) proteins (From Topology) | T: alpha-helical domain in sec1/munc18-like (SM) proteins | F: PF00995 | ECOD (1.6) |
B | PF00995 | e4jc8B3 | A: a/b three-layered sandwiches | X: Rossmann-like domains in Sec1/munc18-like proteins (From Topology) | H: Rossmann-like domains in Sec1/munc18-like proteins (From Topology) | T: Rossmann-like domains in Sec1/munc18-like proteins | F: PF00995 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00995 | Sec1 family (Sec1) | Sec1 family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
HOPS component Vps33 | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR027482 | Sec1-like, domain 2 | Homologous Superfamily | |
IPR000608 | Ubiquitin-conjugating enzyme E2 | Domain | |
IPR043127 | Sec1-like, domain 3a | Homologous Superfamily | |
IPR016135 | Ubiquitin-conjugating enzyme/RWD-like | Homologous Superfamily | |
IPR001619 | Sec1-like protein | Family | |
IPR043155 | Vacuolar protein sorting-associated protein 33, domain 3b | Homologous Superfamily | |
IPR043154 | Sec1-like, domain 1 | Homologous Superfamily | |
IPR036045 | Sec1-like superfamily | Homologous Superfamily |