4ILM
CRISPR RNA Processing endoribonuclease
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | CRISPR-associated proteins | 8052199 | 3001554 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | CRISPR-associated proteins | 8052198 | 3001554 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | CRISPR-associated proteins | 8052199 | 3001554 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | CRISPR-associated proteins | 8052198 | 3001554 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | CRISPR-associated proteins | 8052199 | 3001554 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | CRISPR-associated proteins | 8052198 | 3001554 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | CRISPR-associated proteins | 8052199 | 3001554 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | CRISPR-associated proteins | 8052198 | 3001554 | SCOP2B (2022-06-29) |
I [auth H] | SCOP2B Superfamily | CRISPR-associated proteins | 8052198 | 3001554 | SCOP2B (2022-06-29) |
I [auth H] | SCOP2B Superfamily | CRISPR-associated proteins | 8052199 | 3001554 | SCOP2B (2022-06-29) |
K [auth J] | SCOP2 Family | CRISPR_Cas6-like | 8051425 | 4007361 | SCOP2 (2022-06-29) |
K [auth J] | SCOP2 Superfamily | CRISPR-associated proteins | 8052198 | 3001554 | SCOP2 (2022-06-29) |
K [auth J] | SCOP2 Superfamily | CRISPR-associated proteins | 8052199 | 3001554 | SCOP2 (2022-06-29) |
M [auth L] | SCOP2B Superfamily | CRISPR-associated proteins | 8052198 | 3001554 | SCOP2B (2022-06-29) |
M [auth L] | SCOP2B Superfamily | CRISPR-associated proteins | 8052199 | 3001554 | SCOP2B (2022-06-29) |
O [auth N] | SCOP2B Superfamily | CRISPR-associated proteins | 8052199 | 3001554 | SCOP2B (2022-06-29) |
O [auth N] | SCOP2B Superfamily | CRISPR-associated proteins | 8052198 | 3001554 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF10040 | e4ilmA1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF10040 | ECOD (1.6) |
A | PF17952 | e4ilmA2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF17952 | ECOD (1.6) |
C [auth B] | PF10040 | e4ilmB1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF10040 | ECOD (1.6) |
C [auth B] | PF17952 | e4ilmB2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF17952 | ECOD (1.6) |
E [auth D] | PF10040 | e4ilmD2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF10040 | ECOD (1.6) |
E [auth D] | PF17952 | e4ilmD1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF17952 | ECOD (1.6) |
G [auth F] | PF10040 | e4ilmF1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF10040 | ECOD (1.6) |
G [auth F] | PF17952 | e4ilmF2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF17952 | ECOD (1.6) |
I [auth H] | PF10040 | e4ilmH1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF10040 | ECOD (1.6) |
I [auth H] | PF17952 | e4ilmH2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF17952 | ECOD (1.6) |
K [auth J] | PF10040 | e4ilmJ1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF10040 | ECOD (1.6) |
K [auth J] | PF17952 | e4ilmJ2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF17952 | ECOD (1.6) |
M [auth L] | PF10040 | e4ilmL1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF10040 | ECOD (1.6) |
M [auth L] | PF17952 | e4ilmL2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF17952 | ECOD (1.6) |
O [auth N] | PF10040 | e4ilmN1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF10040 | ECOD (1.6) |
O [auth N] | PF17952 | e4ilmN2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF17952 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.1900 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
C [auth B] | 3.30.70.1900 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
E [auth D] | 3.30.70.1900 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
G [auth F] | 3.30.70.1900 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
I [auth H] | 3.30.70.1900 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
K [auth J] | 3.30.70.1900 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
M [auth L] | 3.30.70.1900 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
O [auth N] | 3.30.70.1900 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17952 | Cas6 N-terminal domain (Cas6_N) | Cas6 N-terminal domain | The CRISPR-Cas system is a prokaryotic defense mechanism against foreign genetic elements. The key elements of this defense system are the Cas proteins and the CRISPR RNA.Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family ... | Domain | |
PF10040 | CRISPR-associated endoribonuclease Cas6 (CRISPR_Cas6) | CRISPR-associated endoribonuclease Cas6 | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
CRISPR-associated endoribonuclease Cas6 2 |
| - | ||
RNA (5'-R(*GP*CP*UP*AP*AP*UP*CP*UP*AP*CP*UP*AP*UP*AP*GP*A)-3') | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041165 | Cas6, N-terminal domain, archaea | Domain | |
IPR019267 | CRISPR-associated protein Cas6, C-terminal | Domain | |
IPR010156 | CRISPR-associated endoribonuclease Cas6 | Family |