4IGB

Crystal structure of the N-terminal domain of the Streptococcus gordonii adhesin Sgo0707

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF20623e4igbA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PF20623ECOD (1.6)
APF18873e4igbA1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: V-region of surface antigen I/II (SA I/II, PAC) (From Topology)T: V-region of surface antigen I/II (SA I/II, PAC)F: PF18873ECOD (1.6)
BPF20623e4igbB2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PF20623ECOD (1.6)
BPF18873e4igbB1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: V-region of surface antigen I/II (SA I/II, PAC) (From Topology)T: V-region of surface antigen I/II (SA I/II, PAC)F: PF18873ECOD (1.6)
CPF20623e4igbC2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PF20623ECOD (1.6)
CPF18873e4igbC1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: V-region of surface antigen I/II (SA I/II, PAC) (From Topology)T: V-region of surface antigen I/II (SA I/II, PAC)F: PF18873ECOD (1.6)
DPF20623e4igbD2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PF20623ECOD (1.6)
DPF18873e4igbD1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: V-region of surface antigen I/II (SA I/II, PAC) (From Topology)T: V-region of surface antigen I/II (SA I/II, PAC)F: PF18873ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.740 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
B2.60.40.740 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
C2.60.40.740 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
D2.60.40.740 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF18873Sgo0707 N-terminal domain (Sgo0707_N1)Sgo0707 N-terminal domainThis domain found at the N-terminus of the cell surface Sgo0707 protein. This domain is called the N1 domain and is involved in host colonisation.The largest domain, N1, comprises a putative binding cleft with a single cysteine located in its centre ...This domain found at the N-terminus of the cell surface Sgo0707 protein. This domain is called the N1 domain and is involved in host colonisation.The largest domain, N1, comprises a putative binding cleft with a single cysteine located in its centre and exhibits an unexpected structural similarity to the variable domains of the streptococcal Antigen I/II adhesins [1].
Domain
PF18655SHIRT domain (SHIRT)SHIRT domainThe SHIRT domain is found in a range of presumed bacterial adhesin proteins.Domain
PF20623Sgo0707 N2 domain (Sgo0707_N2)Sgo0707 N2 domainThis domain represents the N2 domain found in the Sgo0707 adhesin protein [1]. This domain is closely related to Pfam:PF16569.Domain
PF18873Sgo0707 N-terminal domain (Sgo0707_N1)Sgo0707 N-terminal domainThis domain found at the N-terminus of the cell surface Sgo0707 protein. This domain is called the N1 domain and is involved in host colonisation.The largest domain, N1, comprises a putative binding cleft with a single cysteine located in its centre ...This domain found at the N-terminus of the cell surface Sgo0707 protein. This domain is called the N1 domain and is involved in host colonisation.The largest domain, N1, comprises a putative binding cleft with a single cysteine located in its centre and exhibits an unexpected structural similarity to the variable domains of the streptococcal Antigen I/II adhesins [1].
Domain
PF18655SHIRT domain (SHIRT)SHIRT domainThe SHIRT domain is found in a range of presumed bacterial adhesin proteins.Domain
PF20623Sgo0707 N2 domain (Sgo0707_N2)Sgo0707 N2 domainThis domain represents the N2 domain found in the Sgo0707 adhesin protein [1]. This domain is closely related to Pfam:PF16569.Domain
PF18873Sgo0707 N-terminal domain (Sgo0707_N1)Sgo0707 N-terminal domainThis domain found at the N-terminus of the cell surface Sgo0707 protein. This domain is called the N1 domain and is involved in host colonisation.The largest domain, N1, comprises a putative binding cleft with a single cysteine located in its centre ...This domain found at the N-terminus of the cell surface Sgo0707 protein. This domain is called the N1 domain and is involved in host colonisation.The largest domain, N1, comprises a putative binding cleft with a single cysteine located in its centre and exhibits an unexpected structural similarity to the variable domains of the streptococcal Antigen I/II adhesins [1].
Domain
PF18655SHIRT domain (SHIRT)SHIRT domainThe SHIRT domain is found in a range of presumed bacterial adhesin proteins.Domain
PF20623Sgo0707 N2 domain (Sgo0707_N2)Sgo0707 N2 domainThis domain represents the N2 domain found in the Sgo0707 adhesin protein [1]. This domain is closely related to Pfam:PF16569.Domain
PF18873Sgo0707 N-terminal domain (Sgo0707_N1)Sgo0707 N-terminal domainThis domain found at the N-terminus of the cell surface Sgo0707 protein. This domain is called the N1 domain and is involved in host colonisation.The largest domain, N1, comprises a putative binding cleft with a single cysteine located in its centre ...This domain found at the N-terminus of the cell surface Sgo0707 protein. This domain is called the N1 domain and is involved in host colonisation.The largest domain, N1, comprises a putative binding cleft with a single cysteine located in its centre and exhibits an unexpected structural similarity to the variable domains of the streptococcal Antigen I/II adhesins [1].
Domain
PF18655SHIRT domain (SHIRT)SHIRT domainThe SHIRT domain is found in a range of presumed bacterial adhesin proteins.Domain
PF20623Sgo0707 N2 domain (Sgo0707_N2)Sgo0707 N2 domainThis domain represents the N2 domain found in the Sgo0707 adhesin protein [1]. This domain is closely related to Pfam:PF16569.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
LPXTG cell wall surface protein- -
LPXTG cell wall surface protein- -
LPXTG cell wall surface protein- -
LPXTG cell wall surface protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR041030SHIRT domainDomain
IPR026466Fimbrial isopeptide formation D2 domainDomain
IPR046473Sgo0707-like, N2 domainDomain
IPR019931LPXTG cell wall anchor domainDomain
IPR043630Sgo0707, N-terminal domainDomain
IPR041030SHIRT domainDomain
IPR026466Fimbrial isopeptide formation D2 domainDomain
IPR046473Sgo0707-like, N2 domainDomain
IPR019931LPXTG cell wall anchor domainDomain
IPR043630Sgo0707, N-terminal domainDomain
IPR041030SHIRT domainDomain
IPR026466Fimbrial isopeptide formation D2 domainDomain
IPR046473Sgo0707-like, N2 domainDomain
IPR019931LPXTG cell wall anchor domainDomain
IPR043630Sgo0707, N-terminal domainDomain
IPR041030SHIRT domainDomain
IPR026466Fimbrial isopeptide formation D2 domainDomain
IPR046473Sgo0707-like, N2 domainDomain
IPR019931LPXTG cell wall anchor domainDomain
IPR043630Sgo0707, N-terminal domainDomain