Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADUF1471e4evuA1 A: a+b two layersX: Dodecin subunit-likeH: YdgH-like (From Topology)T: YdgH-likeF: DUF1471ECOD (1.6)
BDUF1471e4evuB2 A: a+b two layersX: Dodecin subunit-likeH: YdgH-like (From Topology)T: YdgH-likeF: DUF1471ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.1660.10 Alpha Beta 2-Layer Sandwich Dodecin subunit-like Flavin-binding protein dodecinCATH (4.3.0)
B3.30.1660.10 Alpha Beta 2-Layer Sandwich Dodecin subunit-like Flavin-binding protein dodecinCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF07338YdgH/BhsA/McbA-like domain (YdgH_BhsA-like)YdgH/BhsA/McbA-like domainThis domain is found in several Enterobacterial proteins of around 90 residues in length, including E. coli YdgH, YhcN, BhsA and McbA, which play a role in stress response, biofilm formation and pathogenesis [1,2]. BhsA (also known as ComC) reduces t ...This domain is found in several Enterobacterial proteins of around 90 residues in length, including E. coli YdgH, YhcN, BhsA and McbA, which play a role in stress response, biofilm formation and pathogenesis [1,2]. BhsA (also known as ComC) reduces the permeability of the outer membrane to copper and may decrease biofilm formation by repressing cell-cell interaction and cell surface interaction [3]. Members of this entry have one copy of this domain with the exception of YdgH, which has three copies. The function of this domain is unknown, however, it is suggested to be directly involved in host-pathogen interaction [2].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR025539YdgH proteinFamily
A, B
IPR036275YdgH-like superfamilyHomologous Superfamily
A, B
IPR025543Dodecin-likeHomologous Superfamily
A, B
IPR010854YdgH/BhsA/McbA-like domainDomain