4E1B
Re-refinement of PDB entry 2EQA - SUA5 protein from Sulfolobus tokodaii with bound threonylcarbamoyladenylate
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | YrdC/Sua5-like | 8004466 | 4000384 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Sua5 C-terminal domain-like | 8004467 | 4000386 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | YrdC/RibB-like | 8017697 | 3000166 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Sua5 C-terminal domain-like | 8019807 | 3002028 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01300 | e4e1bA1 | A: a+b complex topology | X: YrdC/RibB (From Topology) | H: YrdC/RibB (From Topology) | T: YrdC/RibB | F: PF01300 | ECOD (1.6) |
A | PF03481 | e4e1bA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF03481 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.870.10 | Alpha Beta | Alpha-Beta Complex | DHBP synthase | DHBP synthase | CATH (4.3.0) |
A | 3.40.50.11030 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Threonylcarbamoyl-AMP synthase, C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03481 | Threonylcarbamoyl-AMP synthase, C-terminal domain (Sua5_C) | Threonylcarbamoyl-AMP synthase, C-terminal domain | This domain can be found in the C terminus of threonylcarbamoyl-AMP synthases, including Sua5 from Saccharomyces cerevisiae and YwlC from Bacillus subtilis. Threonylcarbamoyl-AMP synthase is required for the formation of a threonylcarbamoyl group on ... | Domain | |
PF01300 | Telomere recombination (Sua5_yciO_yrdC) | Telomere recombination | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017945 | DHBP synthase RibB-like alpha/beta domain superfamily | Homologous Superfamily | |
IPR010923 | tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 | Family | |
IPR006070 | Threonylcarbamoyl-AMP synthase-like domain | Domain | |
IPR038385 | Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily | Homologous Superfamily | |
IPR005145 | Threonylcarbamoyl-AMP synthase, C-terminal domain | Domain |