4DQZ
Crystal Structure of C-terminal Half of Bacterial Hen1
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF12623 | e4dqzA1 | A: a+b two layers | X: Glutamine synthetase-like | H: Methyltransferase type 12 N-terminal domain (From Topology) | T: Methyltransferase type 12 N-terminal domain | F: PF12623 | ECOD (1.6) |
B | PF12623 | e4dqzB2 | A: a+b two layers | X: Glutamine synthetase-like | H: Methyltransferase type 12 N-terminal domain (From Topology) | T: Methyltransferase type 12 N-terminal domain | F: PF12623 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.1610.20 | Alpha Beta | 2-Layer Sandwich | c-terminal autoproteolytic domain of nucleoporin nup98 | Hen1, N-terminal domain | CATH (4.3.0) |
B | 3.30.1610.20 | Alpha Beta | 2-Layer Sandwich | c-terminal autoproteolytic domain of nucleoporin nup98 | Hen1, N-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12623 | RNA repair, ligase-Pnkp-associating, region of Hen1 (Hen1_L) | RNA repair, ligase-Pnkp-associating, region of Hen1 | This domain is the N-terminal region of the bacterial Hen1 protein. This protein forms stable hetero-tetramer with Pnkp. The hetero-tetramer was able to repair transfer RNAs cleaved by ribotoxins in vitro [1]. This domain provides the ligase activit ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR024026 | 3'-RNA ribose 2'-O-methyltransferase, Hen1, bacterial | Family | |
IPR013217 | Methyltransferase type 12 | Domain | |
IPR038546 | Hen1, N-terminal domain superfamily | Homologous Superfamily | |
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily | |
IPR026610 | 3'-RNA ribose 2'-O-methyltransferase, Hen1 | Family | |
IPR024740 | Hen1, N-terminal | Domain |