4AE4
The UBAP1 subunit of ESCRT-I interacts with ubiquitin via a novel SOUBA domain
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF21267 | e4ae4A1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: PF21267 | ECOD (1.6) |
A | PF22567 | e4ae4A2 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: PF22567 | ECOD (1.6) |
B | PF21267 | e4ae4B2 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: PF21267 | ECOD (1.6) |
B | PF22567 | e4ae4B1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: PF22567 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.120.1920 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | UBAP1 SOUBA domain | CATH (4.3.0) |
B | 1.20.120.1920 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | UBAP1 SOUBA domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21267 | Ubiquitin-associated protein 1, UBA2 domain (UBAP-1_UBA2) | Ubiquitin-associated protein 1, UBA2 domain | This domain is found in Ubiquitin-associated protein 1 (UBAP-1) and similar proteins predominantly found in animals. UBAP-1 is involved in vesicular trafficking process, as it's a component of an endosome- specific endosomal sorting complex I (ESCRT- ... | Domain | |
PF21267 | Ubiquitin-associated protein 1, UBA2 domain (UBAP-1_UBA2) | Ubiquitin-associated protein 1, UBA2 domain | This domain is found in Ubiquitin-associated protein 1 (UBAP-1) and similar proteins predominantly found in animals. UBAP-1 is involved in vesicular trafficking process, as it's a component of an endosome- specific endosomal sorting complex I (ESCRT- ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038870 | Ubiquitin-associated protein 1 | Family | |
IPR023340 | UMA domain | Domain | |
IPR042575 | Ubiquitin-associated protein 1, C-terminal | Homologous Superfamily | |
IPR009060 | UBA-like superfamily | Homologous Superfamily | |
IPR015940 | Ubiquitin-associated domain | Domain | |
IPR049467 | Ubiquitin-associated protein 1-like, UBA2 domain | Domain | |
IPR038870 | Ubiquitin-associated protein 1 | Family | |
IPR023340 | UMA domain | Domain | |
IPR042575 | Ubiquitin-associated protein 1, C-terminal | Homologous Superfamily | |
IPR009060 | UBA-like superfamily | Homologous Superfamily | |
IPR015940 | Ubiquitin-associated domain | Domain | |
IPR049467 | Ubiquitin-associated protein 1-like, UBA2 domain | Domain |