3SDM
Structure of oligomeric kinase/RNase Ire1 in complex with an oligonucleotide
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ire1-RNaseL RNase domain-like | 8089775 | 3002392 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Protein kinase-like (PK-like) | 8089777 | 3000066 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ire1-RNaseL RNase domain-like | 8089775 | 3002392 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Protein kinase-like (PK-like) | 8089777 | 3000066 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ire1-RNaseL RNase domain-like | 8089775 | 3002392 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Protein kinase-like (PK-like) | 8089777 | 3000066 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Protein kinase-like (PK-like) | 8089777 | 3000066 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Ire1-RNaseL RNase domain-like | 8089775 | 3002392 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Ire1-RNaseL RNase domain-like | 8089775 | 3002392 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Protein kinase-like (PK-like) | 8089777 | 3000066 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Ire1-RNaseL RNase domain-like | 8089775 | 3002392 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Protein kinase-like (PK-like) | 8089777 | 3000066 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Ire1-RNaseL RNase domain-like | 8089775 | 3002392 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Protein kinase-like (PK-like) | 8089777 | 3000066 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF06479 | e3sdmA2 | A: alpha bundles | X: Four-helical up-and-down bundle | H: HEPN | T: Nucleotidyltransferase substrate binding subunit/domain | F: PF06479 | ECOD (1.6) |
A | PF00069 | e3sdmA1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: PF00069 | ECOD (1.6) |
B | PF06479 | e3sdmB2 | A: alpha bundles | X: Four-helical up-and-down bundle | H: HEPN | T: Nucleotidyltransferase substrate binding subunit/domain | F: PF06479 | ECOD (1.6) |
B | PF00069 | e3sdmB1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: PF00069 | ECOD (1.6) |
C | PF06479 | e3sdmC2 | A: alpha bundles | X: Four-helical up-and-down bundle | H: HEPN | T: Nucleotidyltransferase substrate binding subunit/domain | F: PF06479 | ECOD (1.6) |
C | PF00069 | e3sdmC1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: PF00069 | ECOD (1.6) |
D | PF06479 | e3sdmD2 | A: alpha bundles | X: Four-helical up-and-down bundle | H: HEPN | T: Nucleotidyltransferase substrate binding subunit/domain | F: PF06479 | ECOD (1.6) |
D | PF00069 | e3sdmD1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: PF00069 | ECOD (1.6) |
E | PF06479 | e3sdmE2 | A: alpha bundles | X: Four-helical up-and-down bundle | H: HEPN | T: Nucleotidyltransferase substrate binding subunit/domain | F: PF06479 | ECOD (1.6) |
E | PF00069 | e3sdmE1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: PF00069 | ECOD (1.6) |
F | PF06479 | e3sdmF2 | A: alpha bundles | X: Four-helical up-and-down bundle | H: HEPN | T: Nucleotidyltransferase substrate binding subunit/domain | F: PF06479 | ECOD (1.6) |
F | PF00069 | e3sdmF1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: PF00069 | ECOD (1.6) |
G | PF06479 | e3sdmG2 | A: alpha bundles | X: Four-helical up-and-down bundle | H: HEPN | T: Nucleotidyltransferase substrate binding subunit/domain | F: PF06479 | ECOD (1.6) |
G | PF00069 | e3sdmG1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: PF00069 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR018391 | Pyrrolo-quinoline quinone beta-propeller repeat | Repeat | |
IPR038357 | KEN domain superfamily | Homologous Superfamily | |
IPR045133 | Serine/threonine-protein kinase/endoribonuclease IRE1/2-like | Family | |
IPR011047 | Quinoprotein alcohol dehydrogenase-like superfamily | Homologous Superfamily | |
IPR000719 | Protein kinase domain | Domain | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily | |
IPR010513 | KEN domain | Domain | |
IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
IPR008271 | Serine/threonine-protein kinase, active site | Active Site |