3OQT

Crystal structure of Rv1498A protein from mycobacterium tuberculosis

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3oqta_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
B	d3oqtb_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
C	d3oqtc_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
D	d3oqtd_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
E	d3oqte_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
F	d3oqtf_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
G	d3oqtg_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
H	d3oqth_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
I	d3oqti_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
J	d3oqtj_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
K	d3oqtk_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
L	d3oqtl_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
M	d3oqtm_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
N	d3oqtn_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
O	d3oqto_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
P	d3oqtp_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Dodecin-like	8086101	4000568	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Dodecin-like	8086102	3000608	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF07311	e3oqtA1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
B	PF07311	e3oqtB1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
C	PF07311	e3oqtC1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
D	PF07311	e3oqtD1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
E	PF07311	e3oqtE1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
F	PF07311	e3oqtF1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
G	PF07311	e3oqtG1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
H	PF07311	e3oqtH1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
I	PF07311	e3oqtI1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
J	PF07311	e3oqtJ1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
K	PF07311	e3oqtK1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
L	PF07311	e3oqtL1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
M	PF07311	e3oqtM1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
N	PF07311	e3oqtN1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
O	PF07311	e3oqtO1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)
P	PF07311	e3oqtP1	A: a+b two layers	X: Dodecin subunit-like	H: Flavin-binding protein dodecin-like (From Topology)	T: Flavin-binding protein dodecin-like	F: PF07311	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
B	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
C	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
D	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
E	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
F	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
G	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
H	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
I	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
J	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
K	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
L	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
M	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
N	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
O	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
P	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	PF07311	Dodecin (Dodecin)	Dodecin	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	Rv1498A PROTEIN	binding nucleoside phosphate binding organic cyclic compound binding nucleotide binding heterocyclic compound binding small molecule binding	-	extracellular region cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR036694	Dodecin-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR009923	Dodecin	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR025543	Dodecin-like	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.