3LYV
Crystal structure of a domain of ribosome-associated factor Y from streptococcus pyogenes serotype M6. Northeast Structural Genomics Consortium target id DR64A
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Hibernation promoting factor (HPF) C-terminal domain-like | 8052700 | 3002136 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Hibernation promoting factor (HPF) C-terminal domain-like | 8052700 | 3002136 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Hibernation promoting factor (HPF) C-terminal domain-like | 8052700 | 3002136 | SCOP2B (2022-06-29) |
D | SCOP2 Family | Hibernation promoting factor (HPF) C-terminal domain-like | 8045351 | 4004430 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | Hibernation promoting factor (HPF) C-terminal domain-like | 8052700 | 3002136 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ribosom_S30AE_C | e3lyvA1 | A: a+b two layers | X: Ribosome-associated factor Y (From Topology) | H: Ribosome-associated factor Y (From Topology) | T: Ribosome-associated factor Y | F: Ribosom_S30AE_C | ECOD (1.6) |
B | Ribosom_S30AE_C | e3lyvB1 | A: a+b two layers | X: Ribosome-associated factor Y (From Topology) | H: Ribosome-associated factor Y (From Topology) | T: Ribosome-associated factor Y | F: Ribosom_S30AE_C | ECOD (1.6) |
C | Ribosom_S30AE_C | e3lyvC1 | A: a+b two layers | X: Ribosome-associated factor Y (From Topology) | H: Ribosome-associated factor Y (From Topology) | T: Ribosome-associated factor Y | F: Ribosom_S30AE_C | ECOD (1.6) |
D | Ribosom_S30AE_C | e3lyvD1 | A: a+b two layers | X: Ribosome-associated factor Y (From Topology) | H: Ribosome-associated factor Y (From Topology) | T: Ribosome-associated factor Y | F: Ribosom_S30AE_C | ECOD (1.6) |
E | Ribosom_S30AE_C | e3lyvE1 | A: a+b two layers | X: Ribosome-associated factor Y (From Topology) | H: Ribosome-associated factor Y (From Topology) | T: Ribosome-associated factor Y | F: Ribosom_S30AE_C | ECOD (1.6) |
F | Ribosom_S30AE_C | e3lyvF1 | A: a+b two layers | X: Ribosome-associated factor Y (From Topology) | H: Ribosome-associated factor Y (From Topology) | T: Ribosome-associated factor Y | F: Ribosom_S30AE_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.505.50 | Alpha Beta | 2-Layer Sandwich | SHC Adaptor Protein | Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | CATH (4.3.0) |
B | 3.30.505.50 | Alpha Beta | 2-Layer Sandwich | SHC Adaptor Protein | Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | CATH (4.3.0) |
C | 3.30.505.50 | Alpha Beta | 2-Layer Sandwich | SHC Adaptor Protein | Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | CATH (4.3.0) |
D | 3.30.505.50 | Alpha Beta | 2-Layer Sandwich | SHC Adaptor Protein | Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | CATH (4.3.0) |
E | 3.30.505.50 | Alpha Beta | 2-Layer Sandwich | SHC Adaptor Protein | Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | CATH (4.3.0) |
F | 3.30.505.50 | Alpha Beta | 2-Layer Sandwich | SHC Adaptor Protein | Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003489 | Ribosome hibernation promoting factor/RaiA | Family | |
IPR034694 | Ribosome hibernation promoting factor, long/plastid | Family | |
IPR036567 | Ribosome hibernation promotion factor-like | Homologous Superfamily | |
IPR032528 | Sigma 54 modulation/S30EA ribosomal protein, C-terminal | Domain | |
IPR038416 | Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily | Homologous Superfamily |