3J6B

Structure of the yeast mitochondrial large ribosomal subunit


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ZSCOP2 FamilyRibosomal protein L35p8098751 4003406 SCOP2 (2022-06-29)
ZSCOP2 SuperfamilyL35p-like8098752 3000790 SCOP2 (2022-06-29)
AA [auth 0]SCOP2 FamilyRibosomal protein L368083317 4003715 SCOP2 (2022-06-29)
AA [auth 0]SCOP2 SuperfamilyRibosomal protein L368083318 3001346 SCOP2 (2022-06-29)
CSCOP2B SuperfamilyTranslational proteins8098614 3000811 SCOP2B (2022-06-29)
DA [auth 3]SCOP2 FamilyMitochondrial ribosomal protein L27-like8045632 4004579 SCOP2 (2022-06-29)
DA [auth 3]SCOP2 SuperfamilyMitochondrial ribosomal protein L27-like8053894 3002240 SCOP2 (2022-06-29)
HSCOP2 FamilyRibosomal protein L138066070 4003623 SCOP2 (2022-06-29)
HSCOP2 SuperfamilyRibosomal protein L138066071 3001134 SCOP2 (2022-06-29)
ISCOP2 FamilyRibosomal protein L148072039 4001826 SCOP2 (2022-06-29)
ISCOP2 Superfamily50S Ribosomal protein L14-like8072040 3000433 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
JPF00828e3j6bJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
KPF00252e3j6bK1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
LPF18502e3j6bL2 A: alpha arraysX: KaiA/RbsU domain-likeH: Mitochondrial 54S ribosomal protein L8 C-terminal domain (From Topology)T: Mitochondrial 54S ribosomal protein L8 C-terminal domainF: PF18502ECOD (1.6)
LPF01196e3j6bL1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
MPF01245e3j6bM1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
NPF00829e3j6bN1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
OPF00237e3j6bO1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
PPF00276e3j6bP1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
QPF22682e3j6bQ1 A: beta barrelsX: SH3H: SH3T: SH3F: PF22682ECOD (1.6)
RPF18471e3j6bR2 A: alpha arraysX: Mitochondrial 54S ribosomal protein L2 (From Topology)H: Mitochondrial 54S ribosomal protein L2 (From Topology)T: Mitochondrial 54S ribosomal protein L2F: PF18471ECOD (1.6)
RPF01016e3j6bR1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
SPF00830e3j6bS1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
BPF00181e3j6bB2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
BPF03947e3j6bB1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
TPF06984e3j6bT1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF06984ECOD (1.6)
UPF00327e3j6bU1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
VPF21492e3j6bV1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF21492ECOD (1.6)
WPF01783e3j6bW1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
XF_UNCLASSIFIEDe3j6bX1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
YPF00468e3j6bY1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
ZPF01632e3j6bZ1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
AA [auth 0]PF00444e3j6b01 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
BA [auth 1]PF01161e3j6b11 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PF01161ECOD (1.6)
CA [auth 2]PF09812e3j6b21 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: PF09812ECOD (1.6)
CPF00297e3j6bC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
DA [auth 3]PF09809e3j6b31 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: PF09809ECOD (1.6)
EA [auth 4]PF05047e3j6b41 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
FA [auth 5]PF00636e3j6b51 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: PF00636ECOD (1.6)
FA [auth 5]PF00035e3j6b52 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00035ECOD (1.6)
GA [auth 6]PF11788e3j6b61 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: PF11788ECOD (1.6)
HA [auth 7]PF05046e3j6b71 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: PF05046ECOD (1.6)
IA [auth 8]PF10501e3j6b81 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF10501ECOD (1.6)
JA [auth 9]PF14622e3j6b91 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: PF14622ECOD (1.6)
KA [auth a]PF12824e3j6ba1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF12824ECOD (1.6)
LA [auth b]PF18126e3j6bb1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L25 (From Topology)H: Mitochondrial 54S ribosomal protein L25 (From Topology)T: Mitochondrial 54S ribosomal protein L25F: PF18126ECOD (1.6)
MA [auth c]PF09784e3j6bc1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L31 (From Topology)H: Mitochondrial 54S ribosomal protein L31 (From Topology)T: Mitochondrial 54S ribosomal protein L31F: PF09784ECOD (1.6)
DPF00573e3j6bD1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
NA [auth d]PF12829e3j6bd1 A: a+b three layersX: Mitochondrial homologous recombination protein 1 (From Topology)H: Mitochondrial homologous recombination protein 1 (From Topology)T: Mitochondrial homologous recombination protein 1F: PF12829ECOD (1.6)
EPF00281,PF00673e3j6bE1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
FPF00347e3j6bF1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
GPF01281e3j6bG1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
HPF00572e3j6bH1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
IPF00238e3j6bI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
PF1850254S ribosomal protein L8 C-terminal domain (Mrpl_C)54S ribosomal protein L8 C-terminal domainThis is the C-terminal domain of mitochondrial 54S ribosomal protein L8.Domain
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
PF18471Ribosomal L27 protein C-terminal domain (Ribosomal_L27_C)Ribosomal L27 protein C-terminal domainThis is the C-terminal domain of 54S ribosomal protein L2 (also known as Mitochondrial large ribosomal subunit protein bL27m). bL27 C-terminal region interacts with an expansion segment of 21S rRNA to form part of the central protuberance [1].Domain
PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
PF21492Ribosomal protein L31p, N-terminal (bL31_N)Ribosomal protein L31p, N-terminalRibosomal protein L31p (bL31, also known as 54S ribosomal protein L36), is a component of the mitochondrial ribosome. Overexpression of bL31m suppresses mutations in the COX2 leader peptide-encoding and initiation codon regions [1,2]. This entry repr ...Ribosomal protein L31p (bL31, also known as 54S ribosomal protein L36), is a component of the mitochondrial ribosome. Overexpression of bL31m suppresses mutations in the COX2 leader peptide-encoding and initiation codon regions [1,2]. This entry represents the N-terminal domain of yeast bL31 [3].
Domain
PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
AA [auth 0]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
BA [auth 1]PF01161Phosphatidylethanolamine-binding protein (PBP)Phosphatidylethanolamine-binding protein- Domain
CA [auth 2]PF09812Mitochondrial ribosomal protein L28 (MRP-L28)Mitochondrial ribosomal protein L28- Family
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
DA [auth 3]PF09809Mitochondrial ribosomal protein L27 (MRP-L27)Mitochondrial ribosomal protein L27- Family
EA [auth 4]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
FA [auth 5]PF00636Ribonuclease III domain (Ribonuclease_3)Ribonuclease III domain- Family
FA [auth 5]PF00035Double-stranded RNA binding motif (dsrm)Double-stranded RNA binding motifSequences gathered for seed by HMM_iterative_training Putative motif shared by proteins that bind to dsRNA. At least some DSRM proteins seem to bind to specific RNA targets. Exemplified by Staufen, which is involved in localisation of at least five d ...Sequences gathered for seed by HMM_iterative_training Putative motif shared by proteins that bind to dsRNA. At least some DSRM proteins seem to bind to specific RNA targets. Exemplified by Staufen, which is involved in localisation of at least five different mRNAs in the early Drosophila embryo. Also by interferon-induced protein kinase in humans, which is part of the cellular response to dsRNA.
Domain
GA [auth 6]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
HA [auth 7]PF05046Mitochondrial large subunit ribosomal protein (Img2) (Img2)Mitochondrial large subunit ribosomal protein (Img2)This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1].Domain
JA [auth 9]PF00636Ribonuclease III domain (Ribonuclease_3)Ribonuclease III domain- Family
KA [auth a]PF12824Mitochondrial ribosomal protein subunit L20 (MRP-L20)Mitochondrial ribosomal protein subunit L20This family is the essential mitochondrial ribosomal protein subunit L20 of fungi.Domain
LA [auth b]PF18126Mitochondrial ribosomal protein mL59 (Mitoc_mL59)Mitochondrial ribosomal protein mL59This domain is a protein found in mitochondrial ribosome 54S large sub unit present in species such as Saccharomyces cerevisiae. The domain used to be referred to as MRP25 but is now called mL59 protein. mL59 is known to partially stabilize a change ...This domain is a protein found in mitochondrial ribosome 54S large sub unit present in species such as Saccharomyces cerevisiae. The domain used to be referred to as MRP25 but is now called mL59 protein. mL59 is known to partially stabilize a change in the rRNA path prior to helix 82-ES1 ultimately leading to the stabilization of the phosphate backbone of the tRNA acceptor stem. It is worth noting that the domain is encoded in the nucleus and imported from the cytoplasm [1].
Domain
MA [auth c]PF09784Mitochondrial ribosomal protein L31 (L31)Mitochondrial ribosomal protein L31- Family
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
NA [auth d]PF12829Transcriptional regulation of mitochondrial recombination (Mhr1)Transcriptional regulation of mitochondrial recombination- Family
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
21S ribosomal RNA---
54S ribosomal protein L10, mitochondrial
54S ribosomal protein L16, mitochondrial
54S ribosomal protein L8, mitochondrial
54S ribosomal protein IMG1, mitochondrial
54S ribosomal protein L49, mitochondrial
54S ribosomal protein L22, mitochondrial
54S ribosomal protein L41, mitochondrial
54S ribosomal protein L40, mitochondrial
54S ribosomal protein L2, mitochondrial
54S ribosomal protein L24, mitochondrial
54S ribosomal protein RML2, mitochondrial
54S ribosomal protein L4, mitochondrial
54S ribosomal protein L33, mitochondrial
54S ribosomal protein L36, mitochondrial
54S ribosomal protein L32, mitochondrial
54S ribosomal protein L39, mitochondrial
54S ribosomal protein L34, mitochondrial
mitochondrial ribosomal protein YNL122C
AA [auth 0]54S ribosomal protein RTC6, mitochondrial
BA [auth 1]54S ribosomal protein L35, mitochondrial
CA [auth 2]54S ribosomal protein L28, mitochondrial
54S ribosomal protein L9, mitochondrial
DA [auth 3]54S ribosomal protein L27, mitochondrial
EA [auth 4]54S ribosomal protein L51, mitochondrial
FA [auth 5]54S ribosomal protein L3, mitochondrial
GA [auth 6]54S ribosomal protein L17, mitochondrial
HA [auth 7]54S ribosomal protein IMG2, mitochondrial
IA [auth 8]54S ribosomal protein L13, mitochondrial
JA [auth 9]54S ribosomal protein L15, mitochondrial
KA [auth a]54S ribosomal protein L20, mitochondrial
LA [auth b]54S ribosomal protein L25, mitochondrial
MA [auth c]54S ribosomal protein L31, mitochondrial
54S ribosomal protein YmL6, mitochondrial
NA [auth d]Mitochondrial homologous recombination protein 1
OA [auth e]E-site tRNA---
54S ribosomal protein L7, mitochondrial
54S ribosomal protein L6, mitochondrial
54S ribosomal protein L50, mitochondrial
54S ribosomal protein L23, mitochondrial
54S ribosomal protein L38, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
IPR021131Large ribosomal subunit protein uL15/eL18Domain
IPR030878Large ribosomal subunit protein uL15Family
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
IPR016180Large ribosomal subunit protein uL16 domainDomain
IPR047873Large ribosomal subunit protein uL16Family
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
IPR000456Large ribosomal subunit protein bL17Family
IPR040894Large ribosomal subunit protein bL17m, C-terminal, fungiDomain
IPR001857Large ribosomal subunit protein bL19Family
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR028909Large ribosomal subunit protein bL21-likeFamily
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
IPR001063Large ribosomal subunit protein uL22Family
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
IPR013025Large ribosomal subunit protein uL23-likeFamily
IPR003256Large ribosomal subunit protein uL24Family
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR005824KOWDomain
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
IPR001684Large ribosomal subunit protein bL27Family
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
IPR041244Large ribosomal subunit protein bL27m, C-terminalDomain
IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
IPR026569Large ribosomal subunit protein bL28Family
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family
IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
IPR034600Large ribosomal subunit protein bL31mFamily
IPR048874Ribosomal protein bL31m, N-terminal domainDomain
IPR002677Large ribosomal subunit protein bL32Family
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
IPR001705Large ribosomal subunit protein bL33Family
IPR000271Large ribosomal subunit protein bL34Family
IPR021137Large ribosomal subunit protein bL35-likeFamily
IPR001706Large ribosomal subunit protein bL35Family
IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
AA [auth 0]IPR000473Large ribosomal subunit protein bL36Family
AA [auth 0]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
BA [auth 1]IPR036610PEBP-like superfamilyHomologous Superfamily
BA [auth 1]IPR008914Phosphatidylethanolamine-binding proteinFamily
BA [auth 1]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
CA [auth 2]IPR042831Large ribosomal subunit protein mL40, fungiFamily
CA [auth 2]IPR019192Large ribosomal subunit protein mL40Family
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IPR000597Large ribosomal subunit protein uL3Family
DA [auth 3]IPR019189Large ribosomal subunit protein mL41Family
EA [auth 4]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
EA [auth 4]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
EA [auth 4]IPR039927Large ribosomal subunit protein mL43Family
FA [auth 5]IPR044443Large ribosomal subunit protein mL44, dsRNA binding domain, fungiDomain
FA [auth 5]IPR000999Ribonuclease III domainDomain
FA [auth 5]IPR014720Double-stranded RNA-binding domainDomain
FA [auth 5]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
GA [auth 6]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
GA [auth 6]IPR040008Large ribosomal subunit protein mL46Family
HA [auth 7]IPR007740Large ribosomal subunit protein mL49Family
IA [auth 8]IPR036736ACP-like superfamilyHomologous Superfamily
IA [auth 8]IPR018305Large ribosomal subunit protein mL50Family
JA [auth 9]IPR040030Large ribosomal subunit protein mL57Family
JA [auth 9]IPR000999Ribonuclease III domainDomain
JA [auth 9]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
KA [auth a]IPR024388Large ribosomal subunit protein mL58Family
LA [auth b]IPR040922Large ribosomal subunit protein mL59 domainDomain
LA [auth b]IPR037507Large ribosomal subunit protein mL59Family
MA [auth c]IPR016340Large ribosomal subunit protein mL60Family
IPR013005Large ribosomal subunit protein uL4-likeFamily
IPR002136Large ribosomal subunit protein uL4Family
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
NA [auth d]IPR024629Large ribosomal subunit protein mL67Family
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
IPR002132Large ribosomal subunit protein uL5Family
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
IPR000702Large ribosomal subunit protein uL6-likeFamily
IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
IPR005822Large ribosomal subunit protein uL13Family
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
IPR000218Large ribosomal subunit protein uL14Family
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site