3FY6

Structure from the mobile metagenome of V. Cholerae. Integron cassette protein VCH_CASS3

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AEUF08514e3fy6A1 A: a+b three layersX: Integron cassette protein VCH_CASS3 (From Topology)H: Integron cassette protein VCH_CASS3 (From Topology)T: Integron cassette protein VCH_CASS3F: EUF08514ECOD (1.6)
BEUF08514e3fy6B1 A: a+b three layersX: Integron cassette protein VCH_CASS3 (From Topology)H: Integron cassette protein VCH_CASS3 (From Topology)T: Integron cassette protein VCH_CASS3F: EUF08514ECOD (1.6)
CEUF08514e3fy6C1 A: a+b three layersX: Integron cassette protein VCH_CASS3 (From Topology)H: Integron cassette protein VCH_CASS3 (From Topology)T: Integron cassette protein VCH_CASS3F: EUF08514ECOD (1.6)
DEUF08514e3fy6D1 A: a+b three layersX: Integron cassette protein VCH_CASS3 (From Topology)H: Integron cassette protein VCH_CASS3 (From Topology)T: Integron cassette protein VCH_CASS3F: EUF08514ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.2210.10 Alpha Beta 2-Layer Sandwich Integron cassette protein fold Integron cassette protein superfamilyCATH (4.3.0)
B3.30.2210.10 Alpha Beta 2-Layer Sandwich Integron cassette protein fold Integron cassette protein superfamilyCATH (4.3.0)
C3.30.2210.10 Alpha Beta 2-Layer Sandwich Integron cassette protein fold Integron cassette protein superfamilyCATH (4.3.0)
D3.30.2210.10 Alpha Beta 2-Layer Sandwich Integron cassette protein fold Integron cassette protein superfamilyCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF21648Integron cassette protein (M1E1E6-like)Integron cassette proteinThis domain family is found in a group of bacterial uncharacterised sequences from mobile gene cassettes, including Integron cassette protein from Vibrio cholerae (M1E1E6). This protein forms a dimer in which each protomer adopts a two-layered alpha+ ...This domain family is found in a group of bacterial uncharacterised sequences from mobile gene cassettes, including Integron cassette protein from Vibrio cholerae (M1E1E6). This protein forms a dimer in which each protomer adopts a two-layered alpha+beta fold with an anti-parallel beta-sheet of five strands which curves around a pair of antiparallel helices [1]. Its specific function is unknown.
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR048473Integron cassette proteinDomain
A, B, C, D
IPR048474Integron cassette protein superfamilyHomologous Superfamily