3FKU
Crystal structure of influenza hemagglutinin (H5) in complex with a broadly neutralizing antibody F10
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Influenza hemagglutinin headpiece | 8087747 | 4002506 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Influenza hemagglutinin domain-like | 8087748 | 3001342 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Influenza hemagglutinin domain-like | 8087748 | 3001342 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Influenza hemagglutinin domain-like | 8087748 | 3001342 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Influenza hemagglutinin domain-like | 8087748 | 3001342 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Influenza hemagglutinin domain-like | 8087748 | 3001342 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Influenza hemagglutinin domain-like | 8087748 | 3001342 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Influenza hemagglutinin (stalk) | 8087917 | 4003840 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Influenza hemagglutinin (stalk) | 8087918 | 3001616 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087918 | 3001616 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087918 | 3001616 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087918 | 3001616 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087918 | 3001616 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087918 | 3001616 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00509 | e3fkuA1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: PF00509 | ECOD (1.6) |
C | PF00509 | e3fkuC1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: PF00509 | ECOD (1.6) |
E | PF00509 | e3fkuE1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: PF00509 | ECOD (1.6) |
G | PF00509 | e3fkuG1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: PF00509 | ECOD (1.6) |
I | PF00509 | e3fkuI1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: PF00509 | ECOD (1.6) |
K | PF00509 | e3fkuK1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: PF00509 | ECOD (1.6) |
M [auth X] | PF07686 | e3fkuX2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
N [auth Y] | PF07686 | e3fkuY2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
O [auth Z] | PF07686 | e3fkuZ3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
P [auth S] | PF07686 | e3fkuS2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
Q [auth T] | PF07686 | e3fkuT2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
R [auth U] | PF07686 | e3fkuU2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
F10, anti-influenza hemagglutinin, neutralizing | SCFV-HEAVY-LAMBDA | Homo sapiens (human) | IGHV1-69*01, IGHV1-69*06, IGHV1-69*12, IGHV1-69*13, IGHV1-69*14, IGHV1-69D*01, IGHJ1*01, IGHJ4*01, IGHJ5*01, IGHJ5*02, IGHJ4*02, IGHJ4*03, IGLV10-54*01, IGLJ2*01, IGLJ3*02, IGLJ3*01 | V-DOMAIN VH, V-DOMAIN V-LAMBDA | IG | SCFV-HEAVY-LAMBDA | IMGT (202416-0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001364 | Haemagglutinin, influenzavirus A/B | Family | |
IPR008980 | Viral capsid/haemagglutinin protein | Homologous Superfamily | |
IPR000149 | Haemagglutinin, influenzavirus A | Family | |
IPR013828 | Haemagglutinin, HA1 chain, alpha/beta domain superfamily | Homologous Superfamily | |
IPR001364 | Haemagglutinin, influenzavirus A/B | Family | |
IPR008980 | Viral capsid/haemagglutinin protein | Homologous Superfamily | |
IPR000149 | Haemagglutinin, influenzavirus A | Family | |
IPR013828 | Haemagglutinin, HA1 chain, alpha/beta domain superfamily | Homologous Superfamily |