3D3R
Crystal structure of the hydrogenase assembly chaperone HypC/HupF family protein from Shewanella oneidensis MR-1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3d3ra1 | All beta proteins | OB-fold | HupF/HypC-like | HupF/HypC-like | Hydrogenase expression/formation protein HypC | (Shewanella oneidensis MR-1 ) [TaxId: 211586 ], | SCOPe (2.08) |
A | d3d3ra2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Shewanella oneidensis MR-1 ) [TaxId: 211586 ], | SCOPe (2.08) |
B | d3d3rb2 | All beta proteins | OB-fold | HupF/HypC-like | HupF/HypC-like | Hydrogenase expression/formation protein HypC | (Shewanella oneidensis MR-1 ) [TaxId: 211586 ], | SCOPe (2.08) |
B | d3d3rb3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Shewanella oneidensis MR-1 ) [TaxId: 211586 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | HupF/HypC-like | 8028064 | 4001773 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | HypC/PAN OB-fold domain-like | 8040443 | 3000354 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | HypC/PAN OB-fold domain-like | 8040443 | 3000354 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01455 | e3d3rA1 | A: beta barrels | X: OB-fold | H: HupF/HypC-like (From Topology) | T: HupF/HypC-like | F: PF01455 | ECOD (1.6) |
B | PF01455 | e3d3rB1 | A: beta barrels | X: OB-fold | H: HupF/HypC-like (From Topology) | T: HupF/HypC-like | F: PF01455 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.30.140 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
B | 2.30.30.140 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01455 | HupF/HypC family (HupF_HypC) | HupF/HypC family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Hydrogenase assembly chaperone hypC/hupF |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001109 | Hydrogenase expression/formation protein, HupF/HypC | Family |