3CZ3
Crystal structure of Tomato Aspermy Virus 2b in complex with siRNA
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| E [auth A] | PF03263 | e3cz3A1 | A: alpha arrays | X: Protein 2b (From Topology) | H: Protein 2b (From Topology) | T: Protein 2b | F: PF03263 | ECOD (1.6) |
| F [auth B] | PF03263 | e3cz3B1 | A: alpha arrays | X: Protein 2b (From Topology) | H: Protein 2b (From Topology) | T: Protein 2b | F: PF03263 | ECOD (1.6) |
| G [auth C] | PF03263 | e3cz3C1 | A: alpha arrays | X: Protein 2b (From Topology) | H: Protein 2b (From Topology) | T: Protein 2b | F: PF03263 | ECOD (1.6) |
| H [auth D] | PF03263 | e3cz3D1 | A: alpha arrays | X: Protein 2b (From Topology) | H: Protein 2b (From Topology) | T: Protein 2b | F: PF03263 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| E [auth A] | 1.20.5.3800 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
| F [auth B] | 1.20.5.3800 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
| G [auth C] | 1.20.5.3800 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
| H [auth D] | 1.20.5.3800 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| E [auth A], F [auth B], G [auth C], H [auth D] | PF03263 | Cucumovirus protein 2B (Cucumo_2B) | Cucumovirus protein 2B | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| B [auth F], D [auth H] | RNA (5'-R(P*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*G)-3') | - | - | - |
| A [auth E], C [auth G] | RNA (5'-R(P*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*A)-3') | - | - | - |
| E [auth A], F [auth B], G [auth C], H [auth D] | Protein 2b | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| E [auth A], F [auth B], G [auth C], H [auth D] | IPR004946 | Cucumovirus protein 2B | Family |
