3CA8
Crystal structure of Escherichia coli YdcF, an S-adenosyl-L-methionine utilizing enzyme
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02698 | e3ca8A1 | A: a/b three-layered sandwiches | X: HUP domain-like | H: YdcF (From Topology) | T: YdcF | F: PF02698 | ECOD (1.6) |
B | PF02698 | e3ca8B1 | A: a/b three-layered sandwiches | X: HUP domain-like | H: YdcF (From Topology) | T: YdcF | F: PF02698 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.3620.10 | Mainly Alpha | Orthogonal Bundle | YdcF fold | YdcF like domain | CATH (4.3.0) |
A | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
B | 1.10.3620.10 | Mainly Alpha | Orthogonal Bundle | YdcF fold | YdcF like domain | CATH (4.3.0) |
B | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02698 | DUF218 domain (DUF218) | DUF218 domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Protein ydcF | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003848 | Domain of unknown function DUF218 | Domain | |
IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | Homologous Superfamily |