Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3c5za2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad3c5za1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ed3c5ze2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ed3c5ze1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Bd3c5zb2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Bd3c5zb1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Fd3c5zf2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Fd3c5zf1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Cd3c5zc1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class II MHC alpha chain, C-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Cd3c5zc2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Gd3c5zg1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class II MHC alpha chain, C-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Gd3c5zg2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC alpha chain, N-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Dd3c5zd1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class II MHC beta chain, C-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Dd3c5zd2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Hd3c5zh1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class II MHC beta chain, C-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Hd3c5zh2 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class II MHC beta chain, N-terminal domain house mouse (Mus musculus ) [TaxId: 10090 ], house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyMHC antigen-recognition domain8043807 3000521 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054687 3000071 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyMHC antigen-recognition domain8043807 3000521 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054687 3000071 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054723 3000071 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyMHC antigen-recognition domain8043808 3000521 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like8054723 3000071 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyMHC antigen-recognition domain8043808 3000521 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF07686e3c5zA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
APF09291e3c5zA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF09291ECOD (1.6)
EPF07686e3c5zE1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
EPF09291e3c5zE2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF09291ECOD (1.6)
BPF07654e3c5zB3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
BPF07686e3c5zB4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
FPF07654e3c5zF3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
FPF07686e3c5zF4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
CPF07654e3c5zC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
CPF00993e3c5zC2 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PF00993ECOD (1.6)
GPF07654e3c5zG1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
GPF00993e3c5zG2 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PF00993ECOD (1.6)
DPF07654e3c5zD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
DPF00969e3c5zD2 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PF00969ECOD (1.6)
HPF07654e3c5zH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
HPF00969e3c5zH2 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PF00969ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A, E
TR B3K506 TR-ALPHA Chimeric (chimeric) TRAV6-7/DV9*02, TRAV6-7/DV9*03, TRAV6D-7*04, TRAV6N-7*01, TRAJ34*02, TRAC*01 V-DOMAIN V-ALPHA, C-DOMAIN C-ALPHA TR TR-ALPHA_BETA-2 IMGT (202416-0)
B, F
TR B3K506 TR-BETA-2 Chimeric (chimeric) TRBV13-3*01, TRBJ1-3*01, TRBC2*01, TRBC2*02 V-DOMAIN V-BETA, C-DOMAIN C-BETA-2 TR TR-ALPHA_BETA-2 IMGT (202416-0)
C, G
MH2-AA_MH2-EBu, IAb-3K peptide fused to N-terminus of G-BETA II-ALPHA Mus musculus (house mouse) MH2-AA G-DOMAIN G-ALPHA, C-LIKE-DOMAIN C-LIKE MH MH2-ALPHA_PEPTIDE-BETA IMGT (202416-0)
D, H
MH2-AA_MH2-EBu, IAb-3K peptide fused to N-terminus of G-BETA PEPTIDE-II-BETA Mus musculus (house mouse) H2-AB1*01 G-DOMAIN G-BETA MH MH2-ALPHA_PEPTIDE-BETA IMGT (202416-0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, G
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domain- Domain
C, G
PF00993Class II histocompatibility antigen, alpha domain (MHC_II_alpha)Class II histocompatibility antigen, alpha domain- Domain
D, H
PF00969Class II histocompatibility antigen, beta domain (MHC_II_beta)Class II histocompatibility antigen, beta domain- Domain
D, H
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, E
TCR B3K506 Alpha Chain---
B, F
TCR B3K506 Beta Chain---
C, G
H-2 class II histocompatibility antigen, A-B alpha chain
D, H
3K peptide, Linker, and H-2 class II histocompatibility antigen (A beta chain)