2M3X
Solution structure of Ph1500: a homohexameric protein centered on a 12-bladed beta-propeller
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF20986 | e2m3xA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 12-bladed | F: PF20986 | ECOD (1.6) |
A | PF02933 | e2m3xA2 | A: a+b two layers | X: Cdc48 domain 2-like (From Topology) | H: Cdc48 domain 2-like (From Topology) | T: Cdc48 domain 2-like | F: PF02933 | ECOD (1.6) |
B | PF20986 | e2m3xB1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 12-bladed | F: PF20986 | ECOD (1.6) |
B | PF02933 | e2m3xB2 | A: a+b two layers | X: Cdc48 domain 2-like (From Topology) | H: Cdc48 domain 2-like (From Topology) | T: Cdc48 domain 2-like | F: PF02933 | ECOD (1.6) |
C | PF20986 | e2m3xC1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 12-bladed | F: PF20986 | ECOD (1.6) |
C | PF02933 | e2m3xC2 | A: a+b two layers | X: Cdc48 domain 2-like (From Topology) | H: Cdc48 domain 2-like (From Topology) | T: Cdc48 domain 2-like | F: PF02933 | ECOD (1.6) |
D | PF20986 | e2m3xD1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 12-bladed | F: PF20986 | ECOD (1.6) |
D | PF02933 | e2m3xD2 | A: a+b two layers | X: Cdc48 domain 2-like (From Topology) | H: Cdc48 domain 2-like (From Topology) | T: Cdc48 domain 2-like | F: PF02933 | ECOD (1.6) |
E | PF20986 | e2m3xE1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 12-bladed | F: PF20986 | ECOD (1.6) |
E | PF02933 | e2m3xE2 | A: a+b two layers | X: Cdc48 domain 2-like (From Topology) | H: Cdc48 domain 2-like (From Topology) | T: Cdc48 domain 2-like | F: PF02933 | ECOD (1.6) |
F | PF20986 | e2m3xF1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 12-bladed | F: PF20986 | ECOD (1.6) |
F | PF02933 | e2m3xF2 | A: a+b two layers | X: Cdc48 domain 2-like (From Topology) | H: Cdc48 domain 2-like (From Topology) | T: Cdc48 domain 2-like | F: PF02933 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.330.10 | Alpha Beta | Roll | Vcp-like ATPase | Chain A, domain 2 | CATH (4.3.0) |
A | 2.40.10.360 | Mainly Beta | Beta Barrel | Thrombin, subunit H | CATH (4.3.0) | |
B | 3.10.330.10 | Alpha Beta | Roll | Vcp-like ATPase | Chain A, domain 2 | CATH (4.3.0) |
B | 2.40.10.360 | Mainly Beta | Beta Barrel | Thrombin, subunit H | CATH (4.3.0) | |
C | 3.10.330.10 | Alpha Beta | Roll | Vcp-like ATPase | Chain A, domain 2 | CATH (4.3.0) |
C | 2.40.10.360 | Mainly Beta | Beta Barrel | Thrombin, subunit H | CATH (4.3.0) | |
D | 3.10.330.10 | Alpha Beta | Roll | Vcp-like ATPase | Chain A, domain 2 | CATH (4.3.0) |
D | 2.40.10.360 | Mainly Beta | Beta Barrel | Thrombin, subunit H | CATH (4.3.0) | |
E | 3.10.330.10 | Alpha Beta | Roll | Vcp-like ATPase | Chain A, domain 2 | CATH (4.3.0) |
E | 2.40.10.360 | Mainly Beta | Beta Barrel | Thrombin, subunit H | CATH (4.3.0) | |
F | 3.10.330.10 | Alpha Beta | Roll | Vcp-like ATPase | Chain A, domain 2 | CATH (4.3.0) |
F | 2.40.10.360 | Mainly Beta | Beta Barrel | Thrombin, subunit H | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02933 | Cell division protein 48 (CDC48), domain 2 (CDC48_2) | Cell division protein 48 (CDC48), domain 2 | This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at t ... | Domain | |
PF20986 | Domain of unknown function (DUF6849) (DUF6849) | Domain of unknown function (DUF6849) | This domain is found in uncharacterised archaeal proteins. It is found C-terminal to Pfam:PF02933, in CDC48 proteins. Its function is unknown. | Domain |