Annotations: 2VG3

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Undecaprenyl diphosphate synthase	8098984	3000594	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Undecaprenyl diphosphate synthase	8098984	3000594	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Undecaprenyl diphosphate synthase	8098984	3000594	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Undecaprenyl diphosphate synthase	8098984	3000594	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF01255	e2vg3A1	A: a/b three-layered sandwiches	X: Undecaprenyl diphosphate synthase (From Topology)	H: Undecaprenyl diphosphate synthase (From Topology)	T: Undecaprenyl diphosphate synthase	F: PF01255	ECOD (1.6)
B	PF01255	e2vg3B1	A: a/b three-layered sandwiches	X: Undecaprenyl diphosphate synthase (From Topology)	H: Undecaprenyl diphosphate synthase (From Topology)	T: Undecaprenyl diphosphate synthase	F: PF01255	ECOD (1.6)
C	PF01255	e2vg3C1	A: a/b three-layered sandwiches	X: Undecaprenyl diphosphate synthase (From Topology)	H: Undecaprenyl diphosphate synthase (From Topology)	T: Undecaprenyl diphosphate synthase	F: PF01255	ECOD (1.6)
D	PF01255	e2vg3D1	A: a/b three-layered sandwiches	X: Undecaprenyl diphosphate synthase (From Topology)	H: Undecaprenyl diphosphate synthase (From Topology)	T: Undecaprenyl diphosphate synthase	F: PF01255	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.1180.10	Alpha Beta	3-Layer(aba) Sandwich	Undecaprenyl pyrophosphate synthetase	Decaprenyl diphosphate synthase-like	CATH (4.3.0)
B	3.40.1180.10	Alpha Beta	3-Layer(aba) Sandwich	Undecaprenyl pyrophosphate synthetase	Decaprenyl diphosphate synthase-like	CATH (4.3.0)
C	3.40.1180.10	Alpha Beta	3-Layer(aba) Sandwich	Undecaprenyl pyrophosphate synthetase	Decaprenyl diphosphate synthase-like	CATH (4.3.0)
D	3.40.1180.10	Alpha Beta	3-Layer(aba) Sandwich	Undecaprenyl pyrophosphate synthetase	Decaprenyl diphosphate synthase-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01255	Putative undecaprenyl diphosphate synthase (Prenyltransf)	Putative undecaprenyl diphosphate synthase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	UNDECAPRENYL PYROPHOSPHATE SYNTHETASE	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding Z-farnesyl diphosphate synthase activity transferase activity transferase activity, transferring alkyl or aryl (other than methyl) groups catalytic activity polyprenyltransferase activity prenyltransferase activity dehydrodolichyl diphosphate synthase activity di-trans,poly-cis-undecaprenyl-diphosphate synthase activity cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding Z-farnesyl diphosphate synthase activity transferase activity transferase activity, transferring alkyl or aryl (other than methyl) groups catalytic activity polyprenyltransferase activity prenyltransferase activity dehydrodolichyl diphosphate synthase activity di-trans,poly-cis-undecaprenyl-diphosphate synthase activity manganese ion binding transition metal ion binding all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity	polyprenol metabolic process polyprenol biosynthetic process small molecule biosynthetic process isoprenoid biosynthetic process cellular biosynthetic process organic hydroxy compound metabolic process cellular metabolic process lipid biosynthetic process alcohol metabolic process primary metabolic process organic substance metabolic process biosynthetic process organic hydroxy compound biosynthetic process cellular lipid metabolic process alcohol biosynthetic process polyprenol metabolic process polyprenol biosynthetic process small molecule biosynthetic process isoprenoid biosynthetic process cellular biosynthetic process organic hydroxy compound metabolic process cellular metabolic process lipid biosynthetic process alcohol metabolic process primary metabolic process organic substance metabolic process biosynthetic process organic hydroxy compound biosynthetic process cellular lipid metabolic process alcohol biosynthetic process organic substance biosynthetic process small molecule metabolic process metabolic process cellular process isoprenoid metabolic process lipid metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol cell periphery plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR001441	Decaprenyl diphosphate synthase-like	Family
A, B, C, D	IPR018520	Di-trans-poly-cis-decaprenylcistransferase-like, conserved site	Conserved Site
A, B, C, D	IPR036424	Decaprenyl diphosphate synthase-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.