2ROK
Solution structure of the cap-binding domain of PARN complexed with the cap analog
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2roka1 | Alpha and beta proteins (a+b) | Ferredoxin-like | RNA-binding domain, RBD, aka RNA recognition motif (RRM) | Canonical RBD | automated matches | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A | d2roka3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A | d2roka2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | RNA-binding domain RBD | 8043557 | 3000110 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08675 | RNA binding domain (RNA_bind) | RNA binding domain | This domain corresponds to the RNA binding domain of Poly(A)-specific ribonuclease (PARN). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036397 | Ribonuclease H superfamily | Homologous Superfamily | |
IPR014789 | Poly(A)-specific ribonuclease, RNA-binding | Domain | |
IPR001374 | R3H domain | Domain | |
IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily | |
IPR034042 | PARN, R3H domain | Domain | |
IPR036867 | R3H domain superfamily | Homologous Superfamily | |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily | |
IPR006941 | Ribonuclease CAF1 | Family | |
IPR035979 | RNA-binding domain superfamily | Homologous Superfamily |