2QHB
Crystal structure of NgTRF complexed with telomeric DNA
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth A] | d2qhba_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Myb/SANT domain | Telomere binding protein TBP1 | Tobacco (Nicotiana glutinosa ) [TaxId: 35889 ], | SCOPe (2.08) |
F [auth B] | d2qhbb_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Myb/SANT domain | Telomere binding protein TBP1 | Tobacco (Nicotiana glutinosa ) [TaxId: 35889 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E [auth A] | SCOP2B Superfamily | Homeodomain-like | 8087318 | 3000001 | SCOP2B (2022-06-29) |
F [auth B] | SCOP2B Superfamily | Homeodomain-like | 8087318 | 3000001 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth A] | PF00249 | e2qhbA1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00249 | ECOD (1.6) |
F [auth B] | PF00249 | e2qhbB1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00249 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
E [auth A] | 1.10.246.220 | Mainly Alpha | Orthogonal Bundle | Serum Albumin | Chain A, Domain 1 | CATH (4.3.0) |
F [auth B] | 1.10.246.220 | Mainly Alpha | Orthogonal Bundle | Serum Albumin | Chain A, Domain 1 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
E [auth A], F [auth B] | IPR001005 | SANT/Myb domain | Domain |
E [auth A], F [auth B] | IPR017930 | Myb domain | Domain |
E [auth A], F [auth B] | IPR031105 | Telomere repeat-binding protein, plant | Family |
E [auth A], F [auth B] | IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |
E [auth A], F [auth B] | IPR000626 | Ubiquitin-like domain | Domain |
E [auth A], F [auth B] | IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily |