Crystal structure of a polC-type DNA polymerase III exonuclease domain from Thermotoga maritima
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2 Family | DnaQ-like 3'-5' exonuclease | 8071357 | 4000547 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ribonuclease H-like | 8071358 | 3000143 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Ribonuclease H-like | 8071358 | 3000143 | SCOP2B (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | PF00929 | e2p1jA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00929 | ECOD (1.6) |
B | PF00929 | e2p1jB1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00929 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| DNA polymerase III polC-type | | | |
Chains | Accession | Name | Type |
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| IPR036397 | Ribonuclease H superfamily | Homologous Superfamily |
| IPR006054 | DNA polymerase III epsilon subunit, exonuclease domain | Domain |
| IPR040982 | DNA polymerase III alpha subunit finger domain | Domain |
| IPR004013 | PHP domain | Domain |
| IPR006308 | DNA polymerase III, alpha subunit, PolC-type, Gram-positive bacteria | Family |
| IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type | Domain |
| IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |
| IPR003141 | Polymerase/histidinol phosphatase, N-terminal | Domain |
| IPR011708 | Bacterial DNA polymerase III, alpha subunit, NTPase domain | Domain |
| IPR029460 | DNA polymerase, helix-hairpin-helix motif | Domain |
| IPR004805 | Error-prone DNA polymerase/DNA polymerase III subunit alpha DnaE/PolC | Family |
| IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |
| IPR013520 | Exonuclease, RNase T/DNA polymerase III | Domain |
| IPR044923 | PolC, middle finger subdomain superfamily | Homologous Superfamily |