2O2X

Crystal structure of a putative had-like phosphatase (mll2559) from mesorhizobium loti at 1.50 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2o2xa1	Alpha and beta proteins (a/b)	HAD-like	HAD-like	Histidinol phosphatase-like	Hypothetical protein Mll2559	(Mesorhizobium loti ) [TaxId: 381 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Histidinol phosphatase-like	8022602	4002690	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	HAD-like	8034982	3001890	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PNK3P	e2o2xA1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: HAD-like	F: PNK3P	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.1000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	HAD superfamily/HAD-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF13242	HAD-hyrolase-like (Hydrolase_like)	HAD-hyrolase-like	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	hypothetical protein	phosphoric ester hydrolase activity D,D-heptose 1,7-bisphosphate phosphatase activity hydrolase activity, acting on ester bonds phosphatase activity hydrolase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	carbohydrate metabolic process organic substance metabolic process primary metabolic process metabolic process carbohydrate derivative biosynthetic process nucleotide-sugar metabolic process cellular metabolic process carbohydrate derivative metabolic process nucleobase-containing compound biosynthetic process ADP-L-glycero-beta-D-manno-heptose biosynthetic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process ADP-L-glycero-beta-D-manno-heptose metabolic process biosynthetic process carbohydrate metabolic process organic substance metabolic process primary metabolic process metabolic process carbohydrate derivative biosynthetic process nucleotide-sugar metabolic process cellular metabolic process carbohydrate derivative metabolic process nucleobase-containing compound biosynthetic process ADP-L-glycero-beta-D-manno-heptose biosynthetic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process ADP-L-glycero-beta-D-manno-heptose metabolic process biosynthetic process nucleobase-containing small molecule metabolic process organic cyclic compound biosynthetic process organic substance biosynthetic process small molecule metabolic process cellular process nucleotide-sugar biosynthetic process phosphorus metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR004446	D,D-heptose 1,7-bisphosphate phosphatase	Family
A	IPR006543	Histidinol-phosphate phosphatase	Domain
A	IPR006549	HAD-superfamily hydrolase,subfamily IIIA	Domain
A	IPR036412	HAD-like superfamily	Homologous Superfamily
A	IPR023214	HAD superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.