Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2noca1 Alpha and beta proteins (a+b) Dodecin subunit-like YdgH-like YdgH-like Putative periplasmic protein YahO (Salmonella enterica ) [TaxId: 28901 ], SCOPe (2.08)
Ad2noca2 Artifacts Tags Tags Tags C-terminal Tags (Salmonella enterica ) [TaxId: 28901 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyYdgH-like8022432 4002578 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyYdgH-like8034812 3001436 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF07338e2nocA1 A: a+b two layersX: Dodecin subunit-likeH: YdgH-like (From Topology)T: YdgH-likeF: PF07338ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.1660.10 Alpha Beta 2-Layer Sandwich Dodecin subunit-like Flavin-binding protein dodecinCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07338YdgH/BhsA/McbA-like domain (YdgH_BhsA-like)YdgH/BhsA/McbA-like domainThis domain is found in several Enterobacterial proteins of around 90 residues in length, including E. coli YdgH, YhcN, BhsA and McbA, which play a role in stress response, biofilm formation and pathogenesis [1,2]. BhsA (also known as ComC) reduces t ...This domain is found in several Enterobacterial proteins of around 90 residues in length, including E. coli YdgH, YhcN, BhsA and McbA, which play a role in stress response, biofilm formation and pathogenesis [1,2]. BhsA (also known as ComC) reduces the permeability of the outer membrane to copper and may decrease biofilm formation by repressing cell-cell interaction and cell surface interaction [3]. Members of this entry have one copy of this domain with the exception of YdgH, which has three copies. The function of this domain is unknown, however, it is suggested to be directly involved in host-pathogen interaction [2].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036275YdgH-like superfamilyHomologous Superfamily
IPR025543Dodecin-likeHomologous Superfamily
IPR010854YdgH/BhsA/McbA-like domainDomain