2LRR
Solution structure of the R3H domain from human Smubp-2 in complex with 2'-deoxyguanosine-5'-monophosphate
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2lrra_ | Alpha and beta proteins (a+b) | IF3-like | R3H domain | R3H domain | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | R3H domain | 8043763 | 3000516 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.1370.50 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S8 | Chain: A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01424 | R3H domain (R3H) | R3H domain | The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to be binding ssDNA. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041677 | DNA2/NAM7 helicase, helicase domain | Domain | |
IPR034072 | DNA-binding protein SMUBP-2, R3H domain | Domain | |
IPR048761 | Helicase SMUBP-2/HCS1, 1B domain | Domain | |
IPR041679 | DNA2/NAM7 helicase-like, C-terminal | Domain | |
IPR001374 | R3H domain | Domain | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR000058 | Zinc finger, AN1-type | Domain | |
IPR004483 | Helicase SMUBP-2/Hcs1-like | Family | |
IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain | |
IPR035896 | AN1-like Zinc finger | Homologous Superfamily | |
IPR036867 | R3H domain superfamily | Homologous Superfamily | |
IPR047187 | Upf1-like, C-terminal helicase domain | Domain |