2KVQ
Solution structure of NusE:NusG-CTD complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth G] | d2kvqg_ | All beta proteins | SH3-like barrel | Translation proteins SH3-like domain | N-utilization substance G protein NusG, C-terminal domain | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth G] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8080349 | 3000334 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth E] | Ribosomal_S10 | e2kvqE1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: Ribosomal_S10 | ECOD (1.6) |
B [auth G] | KOW | e2kvqG1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: KOW | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth E] | 3.30.70.600 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Ribosomal protein S10 | CATH (4.3.0) |
B [auth G] | 2.30.30.30 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth E] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
B [auth G] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth E] | IPR027486 | Small ribosomal subunit protein uS10 domain | Domain |
A [auth E] | IPR036838 | Small ribosomal subunit protein uS10 domain superfamily | Homologous Superfamily |
A [auth E] | IPR018268 | Small ribosomal subunit protein uS10, conserved site | Conserved Site |
A [auth E] | IPR001848 | Small ribosomal subunit protein uS10 | Family |
B [auth G] | IPR043425 | NusG-like | Family |
B [auth G] | IPR001062 | Transcription antitermination protein, NusG | Family |
B [auth G] | IPR036735 | NusG, N-terminal domain superfamily | Homologous Superfamily |
B [auth G] | IPR014722 | Large ribosomal subunit protein uL2, domain 2 | Homologous Superfamily |
B [auth G] | IPR015869 | Transcription antitermination protein, NusG, bacteria, conserved site | Conserved Site |
B [auth G] | IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily |
B [auth G] | IPR047050 | NusG, N-terminal | Domain |
B [auth G] | IPR005824 | KOW | Domain |
B [auth G] | IPR006645 | NusG-like, N-terminal | Domain |