2HH8

Solution NMR structure of the ydfO protein from Escherichia coli. Northeast Structural Genomics target ER251.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2hh8a1	Alpha and beta proteins (a+b)	YdfO-like	YdfO-like	YdfO-like	Hypothetical protein YdfO	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	YdfO-like	8021834	4002049	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YdfO-like	8034214	3000748	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF1398_C	e2hh8A2	A: a+b duplicates or obligate multimers	X: YdfO-like (From Topology)	H: YdfO-like (From Topology)	T: YdfO-like	F: DUF1398_C	ECOD (1.6)
A	DUF1398_N	e2hh8A1	A: a+b duplicates or obligate multimers	X: YdfO-like (From Topology)	H: YdfO-like (From Topology)	T: YdfO-like	F: DUF1398_N	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.1810.10	Alpha Beta	2-Layer Sandwich	YdfO-like fold	YdfO-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF07166	Protein of unknown function (DUF1398) (DUF1398)	Protein of unknown function (DUF1398)	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR009833	Uncharacterised protein DUF1398	Family
A	IPR036696	YdfO-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.