2B5D

Crystal structure of the novel alpha-amylase AmyC from Thermotoga maritima

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
A [auth X]d2b5dx1 All alpha proteins immunoglobulin/albumin-binding domain-like Families 57/38 glycoside transferase middle domain AmyC C-terminal domain-like Alpha-amylase AmyC (Thermotoga maritima MSB8 ) [TaxId: 243274 ], SCOPe (2.08)
A [auth X]d2b5dx2 Alpha and beta proteins (a/b) 7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase AmyC N-terminal domain-like Alpha-amylase AmyC (Thermotoga maritima MSB8 ) [TaxId: 243274 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth X]SCOP2 FamilyAmyC N-terminal domain-like8025288 4000995 SCOP2 (2022-06-29)
A [auth X]SCOP2 FamilyAmyC C-terminal domain-like8025286 4000618 SCOP2 (2022-06-29)
A [auth X]SCOP2 SuperfamilyGlycoside hydrolase/deacetylase8037667 3001025 SCOP2 (2022-06-29)
A [auth X]SCOP2 SuperfamilyFamilies 57/38 glycoside transferase middle domain8037665 3000997 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth X]PF09210e2b5dX1 A: alpha bundlesX: immunoglobulin/albumin-binding domain-likeH: Families 57/38 glycoside transferase middle domain (From Topology)T: Families 57/38 glycoside transferase middle domainF: PF09210ECOD (1.6)
A [auth X]PF03065e2b5dX2 A: a/b barrelsX: TIM beta/alpha-barrelH: Glycoside hydrolase/deacetylase (From Topology)T: Glycoside hydrolase/deacetylaseF: PF03065ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth X]3.20.110.10 Alpha Beta Alpha-Beta Barrel 7-stranded beta/alpha barrel Glycoside hydrolase 38, N terminal domainCATH (4.3.0)
A [auth X]1.20.1430.10 Mainly Alpha Up-down Bundle immunoglobulin/albumin-binding domain-like Families 57/38 glycoside transferase, middle domainCATH (4.3.0)