2AUS
Crystal structure of the archaeal box H/ACA sRNP Nop10-Cbf5 complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth D] | SCOP2B Superfamily | Nop10-like SnoRNP Znf-like | 8083406 | 3000486 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2 Family | Nucleolar RNA-binding protein Nop10-like | 8083405 | 4000515 | SCOP2 (2022-06-29) |
D [auth B] | SCOP2 Superfamily | Nop10-like SnoRNP Znf-like | 8083406 | 3000486 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | PF01472 | e2ausC2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: PF01472 | ECOD (1.6) |
A [auth C] | PF01509,PF08068,PF16198 | e2ausC1 | A: a+b two layers | X: Alpha-beta plaits | H: Pseudouridine synthase (From Topology) | T: Pseudouridine synthase | F: PF01509,PF08068,PF16198 | ECOD (1.6) |
C [auth A] | PF01472 | e2ausA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: PF01472 | ECOD (1.6) |
C [auth A] | PF01509,PF08068,PF16198 | e2ausA2 | A: a+b two layers | X: Alpha-beta plaits | H: Pseudouridine synthase (From Topology) | T: Pseudouridine synthase | F: PF01509,PF08068,PF16198 | ECOD (1.6) |
B [auth D] | PF04135 | e2ausD1 | A: few secondary structure elements | X: Rubredoxin-like | H: Nucleolar RNA-binding protein Nop10-like (From Topology) | T: Nucleolar RNA-binding protein Nop10-like | F: PF04135 | ECOD (1.6) |
D [auth B] | PF04135 | e2ausB1 | A: few secondary structure elements | X: Rubredoxin-like | H: Nucleolar RNA-binding protein Nop10-like (From Topology) | T: Nucleolar RNA-binding protein Nop10-like | F: PF04135 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth C] | 2.30.130.10 | Mainly Beta | Roll | Archaeosine Trna-guanine Transglycosylase | Chain: A, domain 4 | CATH (4.3.0) |
A [auth C] | 3.30.2350.10 | Alpha Beta | 2-Layer Sandwich | Pseudouridine synthase | Pseudouridine synthase | CATH (4.3.0) |
C [auth A] | 2.30.130.10 | Mainly Beta | Roll | Archaeosine Trna-guanine Transglycosylase | Chain: A, domain 4 | CATH (4.3.0) |
C [auth A] | 3.30.2350.10 | Alpha Beta | 2-Layer Sandwich | Pseudouridine synthase | Pseudouridine synthase | CATH (4.3.0) |
B [auth D] | 2.20.28.40 | Mainly Beta | Single Sheet | Rubrerythrin, domain 2 | H/ACA ribonucleoprotein complex, subunit Nop10 | CATH (4.3.0) |
D [auth B] | 2.20.28.40 | Mainly Beta | Single Sheet | Rubrerythrin, domain 2 | H/ACA ribonucleoprotein complex, subunit Nop10 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], C [auth A] | PF08068 | DKCLD (NUC011) domain (DKCLD) | DKCLD (NUC011) domain | This is a TruB_N/PUA domain associated N-terminal domain of Dyskerin-like proteins [1]. | Domain |
A [auth C], C [auth A] | PF16198 | tRNA pseudouridylate synthase B C-terminal domain (TruB_C_2) | tRNA pseudouridylate synthase B C-terminal domain | - | Family |
A [auth C], C [auth A] | PF01509 | TruB family pseudouridylate synthase (N terminal domain) (TruB_N) | TruB family pseudouridylate synthase (N terminal domain) | - | Family |
A [auth C], C [auth A] | PF01472 | PUA domain (PUA) | PUA domain | - | Family |
B [auth D], D [auth B] | PF04135 | Nucleolar RNA-binding protein, Nop10p family (Nop10p) | Nucleolar RNA-binding protein, Nop10p family | - | Family |