1XM5
Crystal structure of metal-dependent hydrolase ybeY from E. coli, Pfam UPF0054
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1xm5a_ | Alpha and beta proteins (a+b) | Zincin-like | Metalloproteases ('zincins'), catalytic domain | Predicted metal-dependent hydrolase | Hypothetical protein YbeY | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d1xm5b_ | Alpha and beta proteins (a+b) | Zincin-like | Metalloproteases ('zincins'), catalytic domain | Predicted metal-dependent hydrolase | Hypothetical protein YbeY | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
C | d1xm5c_ | Alpha and beta proteins (a+b) | Zincin-like | Metalloproteases ('zincins'), catalytic domain | Predicted metal-dependent hydrolase | Hypothetical protein YbeY | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
D | d1xm5d_ | Alpha and beta proteins (a+b) | Zincin-like | Metalloproteases ('zincins'), catalytic domain | Predicted metal-dependent hydrolase | Hypothetical protein YbeY | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Predicted metal-dependent hydrolase | 8031621 | 4001500 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Metalloproteases (zincins) catalytic domain | 8043999 | 3001975 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Metalloproteases (zincins) catalytic domain | 8043999 | 3001975 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Metalloproteases (zincins) catalytic domain | 8043999 | 3001975 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Metalloproteases (zincins) catalytic domain | 8043999 | 3001975 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02130 | e1xm5A1 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: PF02130 | ECOD (1.6) |
B | PF02130 | e1xm5B1 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: PF02130 | ECOD (1.6) |
C | PF02130 | e1xm5C1 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: PF02130 | ECOD (1.6) |
D | PF02130 | e1xm5D1 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: PF02130 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.390.30 | Alpha Beta | 3-Layer(aba) Sandwich | Collagenase (Catalytic Domain) | Metalloproteases ("zincins"), catalytic domain | CATH (4.3.0) |
B | 3.40.390.30 | Alpha Beta | 3-Layer(aba) Sandwich | Collagenase (Catalytic Domain) | Metalloproteases ("zincins"), catalytic domain | CATH (4.3.0) |
C | 3.40.390.30 | Alpha Beta | 3-Layer(aba) Sandwich | Collagenase (Catalytic Domain) | Metalloproteases ("zincins"), catalytic domain | CATH (4.3.0) |
D | 3.40.390.30 | Alpha Beta | 3-Layer(aba) Sandwich | Collagenase (Catalytic Domain) | Metalloproteases ("zincins"), catalytic domain | CATH (4.3.0) |