1WPK
Methylated Form of N-terminal Transcriptional Regulator Domain of Escherichia Coli Ada Protein
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ada DNA repair protein N-terminal domain (N-Ada 10) | 8035698 | 3001437 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00165 | e1wpkA4 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00165 | ECOD (1.6) |
A | PF02805 | e1wpkA3 | A: few secondary structure elements | X: Ada DNA repair protein, N-terminal domain (N-Ada 10) (From Topology) | H: Ada DNA repair protein, N-terminal domain (N-Ada 10) (From Topology) | T: Ada DNA repair protein, N-terminal domain (N-Ada 10) | F: PF02805 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.10.10 | Alpha Beta | 3-Layer(aba) Sandwich | DNA Methylphosphotriester Repair Domain | DNA Methylphosphotriester Repair Domain | CATH (4.3.0) |
A | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02805 | Metal binding domain of Ada (Ada_Zn_binding) | Metal binding domain of Ada | - | Family | |
PF00165 | Bacterial regulatory helix-turn-helix proteins, AraC family (HTH_AraC) | Bacterial regulatory helix-turn-helix proteins, AraC family | In the absence of arabinose, the N-terminal arm of AraC binds to the DNA binding domain (Pfam:PF00165) and helps to hold the two DNA binding domains in a relative orientation that favours DNA looping. In the presence of arabinose, the arms bind ove ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008332 | Methylguanine DNA methyltransferase, ribonuclease-like domain | Domain | |
IPR036217 | Methylated DNA-protein cysteine methyltransferase, DNA binding domain | Homologous Superfamily | |
IPR018060 | DNA binding HTH domain, AraC-type | Domain | |
IPR035451 | Ada-like domain superfamily | Homologous Superfamily | |
IPR018062 | HTH domain AraC-type, conserved site | Conserved Site | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR036631 | Methylated DNA-protein cysteine methyltransferase domain superfamily | Homologous Superfamily | |
IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily | |
IPR014048 | Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding | Domain | |
IPR001497 | Methylated-DNA-[protein]-cysteine S-methyltransferase, active site | Active Site | |
IPR016221 | Bifunctional regulatory protein Ada | Family | |
IPR004026 | Ada DNA repair, metal-binding | Domain |