1WDL
fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form II (native4)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | ClpP/crotonase | 8001546 | 3000033 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | 6-phosphogluconate dehydrogenase-like | 8017508 | 3000048 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | ClpP/crotonase | 8001546 | 3000033 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | 6-phosphogluconate dehydrogenase-like | 8017508 | 3000048 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Thiolase-like | 8041706 | 3000122 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Thiolase-like | 8041708 | 3000122 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Thiolase-like | 8041706 | 3000122 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Thiolase-like | 8041708 | 3000122 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | F_UNCLASSIFIED | e1wdlB2 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF00725 | e1wdlB1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: PF00725 | ECOD (1.6) |
B | PF02737 | e1wdlB3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF02737 | ECOD (1.6) |
B | PF00378 | e1wdlB4 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: PF00378 | ECOD (1.6) |
A | F_UNCLASSIFIED | e1wdlA2 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF00725 | e1wdlA1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: PF00725 | ECOD (1.6) |
A | PF02737 | e1wdlA3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF02737 | ECOD (1.6) |
A | PF00378 | e1wdlA4 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: PF00378 | ECOD (1.6) |
D | PF00108 | e1wdlD2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF00108 | ECOD (1.6) |
D | PF02803 | e1wdlD1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF02803 | ECOD (1.6) |
C | PF00108 | e1wdlC2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF00108 | ECOD (1.6) |
C | PF02803 | e1wdlC1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: PF02803 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.90.226.10 | Alpha Beta | Alpha-Beta Complex | 2-enoyl-CoA Hydratase | Chain A, domain 1 | CATH (4.3.0) |
B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
B | 1.10.1040.50 | Mainly Alpha | Orthogonal Bundle | N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase | domain 2 | CATH (4.3.0) |
A | 3.90.226.10 | Alpha Beta | Alpha-Beta Complex | 2-enoyl-CoA Hydratase | Chain A, domain 1 | CATH (4.3.0) |
A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
A | 1.10.1040.50 | Mainly Alpha | Orthogonal Bundle | N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase | domain 2 | CATH (4.3.0) |
D | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (4.3.0) |
C | 3.40.47.10 | Alpha Beta | 3-Layer(aba) Sandwich | Peroxisomal Thiolase | Chain A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02737 | 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain (3HCDH_N) | 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain | This family also includes lambda crystallin. | Domain | |
PF00725 | 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain (3HCDH) | 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain | This family also includes lambda crystallin. Some proteins include two copies of this domain. | Domain | |
PF00378 | Enoyl-CoA hydratase/isomerase (ECH_1) | Enoyl-CoA hydratase/isomerase | This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase. | Domain | |
PF02803 | Thiolase, C-terminal domain (Thiolase_C) | Thiolase, C-terminal domain | Thiolase is reported to be structurally related to beta-ketoacyl synthase (Pfam:PF00109), and also chalcone synthase. | Domain | |
PF00108 | Thiolase, N-terminal domain (Thiolase_N) | Thiolase, N-terminal domain | Thiolase is reported to be structurally related to beta-ketoacyl synthase (Pfam:PF00109), and also chalcone synthase. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001753 | Enoyl-CoA hydratase/isomerase | Family | |
IPR029045 | ClpP/crotonase-like domain superfamily | Homologous Superfamily | |
IPR018376 | Enoyl-CoA hydratase/isomerase, conserved site | Conserved Site | |
IPR008927 | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily | Homologous Superfamily | |
IPR006108 | 3-hydroxyacyl-CoA dehydrogenase, C-terminal | Domain | |
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR006180 | 3-hydroxyacyl-CoA dehydrogenase, conserved site | Conserved Site | |
IPR012799 | Fatty oxidation complex, alpha subunit FadB | Family | |
IPR006176 | 3-hydroxyacyl-CoA dehydrogenase, NAD binding | Domain | |
IPR016039 | Thiolase-like | Homologous Superfamily | |
IPR020617 | Thiolase, C-terminal | Domain | |
IPR020616 | Thiolase, N-terminal | Domain | |
IPR020613 | Thiolase, conserved site | Conserved Site | |
IPR012805 | Acetyl-CoA C-acyltransferase FadA | Family | |
IPR020610 | Thiolase, active site | Active Site | |
IPR020615 | Thiolase, acyl-enzyme intermediate active site | Active Site | |
IPR002155 | Thiolase | Family |