1VTO
1.9 A RESOLUTION REFINED STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF TATAAAAG
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth A] | d1vtoa1 | Alpha and beta proteins (a+b) | TBP-like | TATA-box binding protein-like | automated matches | automated matches | (Arabidopsis thaliana ) [TaxId: 3702 ], | SCOPe (2.08) |
F [auth B] | d1vtob1 | Alpha and beta proteins (a+b) | TBP-like | TATA-box binding protein-like | automated matches | automated matches | (Arabidopsis thaliana ) [TaxId: 3702 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E [auth A] | SCOP2B Superfamily | TATA-box binding protein-like | 8036314 | 3000705 | SCOP2B (2022-06-29) |
E [auth A] | SCOP2B Superfamily | TATA-box binding protein-like | 8036311 | 3000705 | SCOP2B (2022-06-29) |
F [auth B] | SCOP2B Superfamily | TATA-box binding protein-like | 8036314 | 3000705 | SCOP2B (2022-06-29) |
F [auth B] | SCOP2B Superfamily | TATA-box binding protein-like | 8036311 | 3000705 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth A] | TBP | e1vtoA1 | A: a+b two layers | X: TBP-like | H: TATA-box binding protein-like (From Topology) | T: TATA-box binding protein-like | F: TBP | ECOD (1.6) |
F [auth B] | TBP | e1vtoB1 | A: a+b two layers | X: TBP-like | H: TATA-box binding protein-like (From Topology) | T: TATA-box binding protein-like | F: TBP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
E [auth A] | 3.30.310.10 | Alpha Beta | 2-Layer Sandwich | TATA-Binding Protein | TATA-Binding Protein | CATH (4.3.0) |
F [auth B] | 3.30.310.10 | Alpha Beta | 2-Layer Sandwich | TATA-Binding Protein | TATA-Binding Protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
E [auth A], F [auth B] | PF00352 | Transcription factor TFIID (or TATA-binding protein, TBP) (TBP) | Transcription factor TFIID (or TATA-binding protein, TBP) | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
E [auth A], F [auth B] | IPR030491 | TATA-box binding protein, conserved site | Conserved Site |
E [auth A], F [auth B] | IPR000814 | TATA-box binding protein | Family |
E [auth A], F [auth B] | IPR012295 | TBP domain superfamily | Homologous Superfamily |
E [auth A], F [auth B] | IPR033710 | TATA-box binding protein, eukaryotic | Family |