1VLA

Crystal structure of Hydroperoxide resistance protein OsmC (TM0919) from Thermotoga maritima at 1.80 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1vlaa1	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	YhfA-like	Hypothetical protein TM0919	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
A	d1vlaa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
C	d1vlac1	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	YhfA-like	Hypothetical protein TM0919	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
C	d1vlac2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
D	d1vlad_	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	YhfA-like	Hypothetical protein TM0919	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
B	d1vlab1	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	YhfA-like	Hypothetical protein TM0919	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
B	d1vlab2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	YhfA-like	8029059	4003719	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	OsmC-like	8041438	3000621	SCOP2 (2022-06-29)
C	SCOP2B Superfamily	OsmC-like	8041438	3000621	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	OsmC-like	8041438	3000621	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	OsmC-like	8041438	3000621	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF02566	e1vlaA1	A: a+b two layers	X: OsmC-like (From Homology)	H: OsmC-like	T: OsmC-like	F: PF02566	ECOD (1.6)
C	PF02566	e1vlaC1	A: a+b two layers	X: OsmC-like (From Homology)	H: OsmC-like	T: OsmC-like	F: PF02566	ECOD (1.6)
D	PF02566	e1vlaD1	A: a+b two layers	X: OsmC-like (From Homology)	H: OsmC-like	T: OsmC-like	F: PF02566	ECOD (1.6)
B	PF02566	e1vlaB2	A: a+b two layers	X: OsmC-like (From Homology)	H: OsmC-like	T: OsmC-like	F: PF02566	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
A	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
C	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
C	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
D	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
D	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
B	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
B	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF02566	OsmC-like protein (OsmC)	OsmC-like protein	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR015946	K homology domain-like, alpha/beta	Homologous Superfamily
A, B, C, D	IPR036102	OsmC/Ohr superfamily	Homologous Superfamily
A, B, C, D	IPR003718	OsmC/Ohr family	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.