1SKN
THE BINDING DOMAIN OF SKN-1 IN COMPLEX WITH DNA: A NEW DNA-BINDING MOTIF
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth P] | d1sknp_ | All alpha proteins | A DNA-binding domain in eukaryotic transcription factors | A DNA-binding domain in eukaryotic transcription factors | A DNA-binding domain in eukaryotic transcription factors | Skn-1 | (Caenorhabditis elegans ) [TaxId: 6239 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth P] | SCOP2 Family | A DNA-binding domain in eukaryotic transcription factors | 8024855 | 4000910 | SCOP2 (2022-06-29) |
C [auth P] | SCOP2 Superfamily | A DNA-binding domain in eukaryotic transcription factors | 8037234 | 3001953 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth P] | PF03131 | e1sknP1 | A: alpha bundles | X: A DNA-binding domain in eukaryotic transcription factors (From Topology) | H: A DNA-binding domain in eukaryotic transcription factors (From Topology) | T: A DNA-binding domain in eukaryotic transcription factors | F: PF03131 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth P] | 1.10.880.10 | Mainly Alpha | Orthogonal Bundle | Transcription Factor Skn-1 | Chain P | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth P] | PF03131 | bZIP Maf transcription factor (bZIP_Maf) | bZIP Maf transcription factor | - | Coiled-coil |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth P] | IPR004827 | Basic-leucine zipper domain | Domain |
C [auth P] | IPR008917 | Transcription factor, Skn-1-like, DNA-binding domain superfamily | Homologous Superfamily |
C [auth P] | IPR004826 | Basic leucine zipper domain, Maf-type | Domain |
C [auth P] | IPR047167 | Nuclear Factor Erythroid-derived 2-like | Family |