Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyMerB-like8003059 4000228 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyWinged helix DNA-binding domain8003062 3000034 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNosL/MerB-like8003060 3000079 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF12324e1s6lA1 A: alpha arraysX: HTHH: HTHT: wingedF: PF12324ECOD (1.6)
APF03243e1s6lA3 A: a+b two layersX: NosL/MerB-likeH: NosL/MerB-like (From Topology)T: NosL/MerB-likeF: PF03243ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF12324Helix-turn-helix domain of alkylmercury lyase (HTH_15)Helix-turn-helix domain of alkylmercury lyaseAlkylmercury lyase (EC:4.99.1.2) cleaves the carbon-mercury bond of organomercurials such as phenylmercuric acetate. This is the N terminal helix-turn-helix domain associated with Pfam:PF03243.Domain
PF03243Alkylmercury lyase (MerB)Alkylmercury lyase- Family

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
alkylmercury lyase  M-CSA #297

Mercury is a highly toxic metal. Toxicity can result from three different mercurial forms: elemental, inorganic ion and organomercurial compounds. The ability of bacteria to detoxify mercurial compounds by reduction and volatilisation is conferred by the Mer genes. Organomercurial lyase (MerB), also known as alkylmercury lyase, mediates the first of the two steps in the microbial detoxification of organomercurial salts (the other catalysed by mercuric reductase). It catalyses the protonolysis of the carbon-mercury bond in a wide range of organomercurial salts (primary, secondary, tertiary, alkyl, vinyl, allyl and aryl) to Hg(II) and the respective organic compound [PMID: 10548738]. Hg(II) is subsequently detoxified by mercuric reductase MerA.

Defined by 3 residues: CYS:A-96ASP:A-99CYS:A-159
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