1Q3R
Crystal structure of the chaperonin from Thermococcus strain KS-1 (nucleotide-free form of single mutant)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | GroEL apical domain-like | 8039624 | 3000963 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | GroEL-intermediate domain like | 8039627 | 3001087 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | GroEL equatorial domain-like | 8039621 | 3001651 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | GroEL-intermediate domain like | 8039627 | 3001087 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | GroEL equatorial domain-like | 8039621 | 3001651 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00118 | e1q3rA1 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: PF00118 | ECOD (1.6) |
A | PF00118 | e1q3rA3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: PF00118 | ECOD (1.6) |
A | PF00118 | e1q3rA2 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: PF00118 | ECOD (1.6) |
B | PF00118 | e1q3rB1 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: PF00118 | ECOD (1.6) |
B | PF00118 | e1q3rB3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: PF00118 | ECOD (1.6) |
B | PF00118 | e1q3rB2 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: PF00118 | ECOD (1.6) |
C | PF00118 | e1q3rC1 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: PF00118 | ECOD (1.6) |
C | PF00118 | e1q3rC3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: PF00118 | ECOD (1.6) |
C | PF00118 | e1q3rC2 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: PF00118 | ECOD (1.6) |
D | PF00118 | e1q3rD1 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: PF00118 | ECOD (1.6) |
D | PF00118 | e1q3rD3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: PF00118 | ECOD (1.6) |
D | PF00118 | e1q3rD2 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: PF00118 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.560.10 | Mainly Alpha | Orthogonal Bundle | GROEL | domain 1 | CATH (4.3.0) |
A | 3.30.260.10 | Alpha Beta | 2-Layer Sandwich | GROEL | domain 2 | CATH (4.3.0) |
A | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (4.3.0) |
B | 1.10.560.10 | Mainly Alpha | Orthogonal Bundle | GROEL | domain 1 | CATH (4.3.0) |
B | 3.30.260.10 | Alpha Beta | 2-Layer Sandwich | GROEL | domain 2 | CATH (4.3.0) |
B | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (4.3.0) |
C | 1.10.560.10 | Mainly Alpha | Orthogonal Bundle | GROEL | domain 1 | CATH (4.3.0) |
C | 3.30.260.10 | Alpha Beta | 2-Layer Sandwich | GROEL | domain 2 | CATH (4.3.0) |
C | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (4.3.0) |
D | 1.10.560.10 | Mainly Alpha | Orthogonal Bundle | GROEL | domain 1 | CATH (4.3.0) |
D | 3.30.260.10 | Alpha Beta | 2-Layer Sandwich | GROEL | domain 2 | CATH (4.3.0) |
D | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR027413 | GroEL-like equatorial domain superfamily | Homologous Superfamily | |
IPR017998 | Chaperone tailless complex polypeptide 1 (TCP-1) | Family | |
IPR027410 | TCP-1-like chaperonin intermediate domain superfamily | Homologous Superfamily | |
IPR002194 | Chaperonin TCP-1, conserved site | Conserved Site | |
IPR027409 | GroEL-like apical domain superfamily | Homologous Superfamily | |
IPR012714 | Thermosome, archaeal | Family | |
IPR002423 | Chaperonin Cpn60/GroEL/TCP-1 family | Family |