1MZP
Structure of the L1 protuberance in the ribosome
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | d1mzpa1 | Multi-domain proteins (alpha and beta) | Ribosomal protein L1 | Ribosomal protein L1 | Ribosomal protein L1 | Ribosomal protein L1 | (Sulfolobus acidocaldarius ) [TaxId: 2285 ], | SCOPe (2.08) |
B [auth A] | d1mzpa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Sulfolobus acidocaldarius ) [TaxId: 2285 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth A] | SCOP2 Family | Ribosomal protein L1p/L10e-like | 8031540 | 4002929 | SCOP2 (2022-06-29) |
B [auth A] | SCOP2 Superfamily | Ribosomal protein L1p/L10e-like | 8043918 | 3001911 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | Ribosomal_L1_2nd_1 | e1mzpA1 | A: a+b two layers | X: a+b domain in Ribosomal protein L1 (From Topology) | H: a+b domain in Ribosomal protein L1 (From Topology) | T: a+b domain in Ribosomal protein L1 | F: Ribosomal_L1_2nd_1 | ECOD (1.6) |
B [auth A] | Ribosomal_L1_1st_1 | e1mzpA2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Rossmann-like domain in Ribosomal protein L1 (From Topology) | T: Rossmann-like domain in Ribosomal protein L1 | F: Ribosomal_L1_1st_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth A] | 3.30.190.20 | Alpha Beta | 2-Layer Sandwich | Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase | Ribosomal protein L1/L10, rRNA-binding domain | CATH (4.3.0) |
B [auth A] | 3.40.50.790 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Ribosomal protein L1/L10, domain II | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth A] | PF00687 | Ribosomal protein L1p/L10e family (Ribosomal_L1) | Ribosomal protein L1p/L10e family | This family includes prokaryotic L1 and eukaryotic L10. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth A] | IPR023673 | Large ribosomal subunit protein uL1, conserved site | Conserved Site |
B [auth A] | IPR023669 | Large ribosomal subunit protein uL1, archaea | Family |
B [auth A] | IPR016095 | Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain | Homologous Superfamily |
B [auth A] | IPR023674 | Ribosomal protein uL1-like | Homologous Superfamily |
B [auth A] | IPR002143 | Large ribosomal subunit protein uL1 | Family |
B [auth A] | IPR028364 | Ribosomal protein uL1/ribosomal biogenesis protein | Family |