1K47
Crystal Structure of the Streptococcus pneumoniae Phosphomevalonate Kinase (PMK)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Phosphomevalonate kinase (PMK) | 8027650 | 4002670 | SCOP2 (2022-06-29) |
A | SCOP2 Family | GHMP Kinase N-terminal domain | 8027648 | 4000959 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | GHMP Kinase C-terminal domain | 8040029 | 3001245 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ribosomal protein S5 domain 2-like | 8040027 | 3000100 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8040027 | 3000100 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | GHMP Kinase C-terminal domain | 8040029 | 3001245 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8040027 | 3000100 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | GHMP Kinase C-terminal domain | 8040029 | 3001245 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | GHMP Kinase C-terminal domain | 8040029 | 3001245 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8040027 | 3000100 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8040027 | 3000100 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | GHMP Kinase C-terminal domain | 8040029 | 3001245 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8040027 | 3000100 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | GHMP Kinase C-terminal domain | 8040029 | 3001245 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GHMP_kinases_N | e1k47A2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: GHMP_kinases_N | ECOD (1.6) |
A | GHMP_kinases_C | e1k47A1 | A: a+b two layers | X: Alpha-beta plaits | H: GHMP Kinase, C-terminal domain (From Topology) | T: GHMP Kinase, C-terminal domain | F: GHMP_kinases_C | ECOD (1.6) |
B | GHMP_kinases_N | e1k47B2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: GHMP_kinases_N | ECOD (1.6) |
B | GHMP_kinases_C | e1k47B1 | A: a+b two layers | X: Alpha-beta plaits | H: GHMP Kinase, C-terminal domain (From Topology) | T: GHMP Kinase, C-terminal domain | F: GHMP_kinases_C | ECOD (1.6) |
C | GHMP_kinases_N | e1k47C2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: GHMP_kinases_N | ECOD (1.6) |
C | GHMP_kinases_C | e1k47C1 | A: a+b two layers | X: Alpha-beta plaits | H: GHMP Kinase, C-terminal domain (From Topology) | T: GHMP Kinase, C-terminal domain | F: GHMP_kinases_C | ECOD (1.6) |
D | GHMP_kinases_N | e1k47D2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: GHMP_kinases_N | ECOD (1.6) |
D | GHMP_kinases_C | e1k47D1 | A: a+b two layers | X: Alpha-beta plaits | H: GHMP Kinase, C-terminal domain (From Topology) | T: GHMP Kinase, C-terminal domain | F: GHMP_kinases_C | ECOD (1.6) |
E | GHMP_kinases_N | e1k47E2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: GHMP_kinases_N | ECOD (1.6) |
E | GHMP_kinases_C | e1k47E1 | A: a+b two layers | X: Alpha-beta plaits | H: GHMP Kinase, C-terminal domain (From Topology) | T: GHMP Kinase, C-terminal domain | F: GHMP_kinases_C | ECOD (1.6) |
F | GHMP_kinases_N | e1k47F2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: GHMP_kinases_N | ECOD (1.6) |
F | GHMP_kinases_C | e1k47F1 | A: a+b two layers | X: Alpha-beta plaits | H: GHMP Kinase, C-terminal domain (From Topology) | T: GHMP Kinase, C-terminal domain | F: GHMP_kinases_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006204 | GHMP kinase N-terminal domain | Domain | |
IPR035102 | Phosphomevalonate kinase | Family | |
IPR013750 | GHMP kinase, C-terminal domain | Domain | |
IPR020568 | Ribosomal protein uS5 domain 2-type superfamily | Homologous Superfamily | |
IPR005917 | Phosphomevalonate kinase, bacteria | Family | |
IPR036554 | GHMP kinase, C-terminal domain superfamily | Homologous Superfamily | |
IPR014721 | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup | Homologous Superfamily |