1IR6
Crystal structure of exonuclease RecJ bound to manganese
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1ir6a_ | Alpha and beta proteins (a/b) | DHH phosphoesterases | DHH phosphoesterases | Exonuclease RecJ | Exonuclease RecJ | (Thermus thermophilus ) [TaxId: 274 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DHHA1 | e1ir6A1 | A: a+b three layers | X: C-terminal domain in DHH phosphoesterases (From Topology) | H: C-terminal domain in DHH phosphoesterases (From Topology) | T: C-terminal domain in DHH phosphoesterases | F: DHHA1 | ECOD (1.6) |
A | DHH | e1ir6A2 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: DHH phosphoesterases | F: DHH | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.1640.30 | Alpha Beta | Alpha-Beta Complex | inorganic pyrophosphatase (n-terminal core) | CATH (4.3.0) | |
A | 3.10.310.30 | Alpha Beta | Roll | Diaminopimelate Epimerase | Chain A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02272 | DHHA1 domain (DHHA1) | DHHA1 domain | - | Family | |
PF01368 | DHH family (DHH) | DHH family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
exonuclease RecJ | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001667 | DDH domain | Domain | |
IPR038763 | DHH phosphoesterase superfamily | Homologous Superfamily | |
IPR003156 | DHHA1 domain | Domain | |
IPR041122 | RecJ, OB domain | Domain |