1HIW
TRIMERIC HIV-1 MATRIX PROTEIN
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Retroviral matrix proteins | 8072649 | 3000562 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Retroviral matrix proteins | 8072649 | 3000562 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Retroviral matrix proteins | 8072649 | 3000562 | SCOP2B (2022-06-29) |
E [auth R] | SCOP2B Superfamily | Retroviral matrix proteins | 8072649 | 3000562 | SCOP2B (2022-06-29) |
F [auth S] | SCOP2B Superfamily | Retroviral matrix proteins | 8072649 | 3000562 | SCOP2B (2022-06-29) |
D [auth Q] | SCOP2B Superfamily | Retroviral matrix proteins | 8072649 | 3000562 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00540 | e1hiwA1 | A: alpha arrays | X: Retroviral matrix proteins (From Topology) | H: Retroviral matrix proteins (From Topology) | T: Retroviral matrix proteins | F: PF00540 | ECOD (1.6) |
B | PF00540 | e1hiwB1 | A: alpha arrays | X: Retroviral matrix proteins (From Topology) | H: Retroviral matrix proteins (From Topology) | T: Retroviral matrix proteins | F: PF00540 | ECOD (1.6) |
C | PF00540 | e1hiwC1 | A: alpha arrays | X: Retroviral matrix proteins (From Topology) | H: Retroviral matrix proteins (From Topology) | T: Retroviral matrix proteins | F: PF00540 | ECOD (1.6) |
E [auth R] | PF00540 | e1hiwR1 | A: alpha arrays | X: Retroviral matrix proteins (From Topology) | H: Retroviral matrix proteins (From Topology) | T: Retroviral matrix proteins | F: PF00540 | ECOD (1.6) |
F [auth S] | PF00540 | e1hiwS1 | A: alpha arrays | X: Retroviral matrix proteins (From Topology) | H: Retroviral matrix proteins (From Topology) | T: Retroviral matrix proteins | F: PF00540 | ECOD (1.6) |
D [auth Q] | PF00540 | e1hiwQ1 | A: alpha arrays | X: Retroviral matrix proteins (From Topology) | H: Retroviral matrix proteins (From Topology) | T: Retroviral matrix proteins | F: PF00540 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.150.90 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
B | 1.10.150.90 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
C | 1.10.150.90 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
E [auth R] | 1.10.150.90 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
F [auth S] | 1.10.150.90 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
D [auth Q] | 1.10.150.90 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00540 | gag gene protein p17 (matrix protein) (Gag_p17) | gag gene protein p17 (matrix protein) | The matrix protein forms an icosahedral shell associated with the inner membrane of the mature immunodeficiency virus. | Domain |