Atomic resolution crystal structure of an AAB collagen heterotrimer
Jalan, A.A., Hartgerink, J.D., Brear, P., Leitinger, B., Farndale, R.W.(2019) Nat Chem Biol 
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
(2019) Nat Chem Biol 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Leading Chain of the AAB Collagen Heterotrimer | 49 | Homo sapiens | Mutation(s): 0  | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Middle Chain of the AAB Collagen Heterotrimer | 50 | Homo sapiens | Mutation(s): 0  | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Trailing Chain of the AAB Collagen Heterotrimer | 49 | Homo sapiens | Mutation(s): 0  | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | D [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
EDO Query on EDO | E [auth C] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Modified Residues 2 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
HYP Query on HYP | A | L-PEPTIDE LINKING | C5 H9 N O3 | PRO | |
NLE Query on NLE | A | L-PEPTIDE LINKING | C6 H13 N O2 | LEU |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 19.736 | α = 86.361 |
b = 28.076 | β = 86.681 |
c = 48.384 | γ = 77.21 |
Software Name | Purpose |
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PHENIX | refinement |
REFMAC | refinement |
Aimless | data scaling |
PHASER | phasing |
XDS | data reduction |
Funding Organization | Location | Grant Number |
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Royal Society | United Kingdom | NF140721 |