Download MendeleyA Megaviridae Orphan Gene Encodes a New Nucleotidyl Transferase
Ciaccafava, A., Lartigue, A., Mansuelle, P., Jeudy, S., Abergel, C.To be published.
4AMQ
A Megaviridae Orfan gene encodes a new nucleotidyl transferase
- PDB DOI: https://doi.org/10.2210/pdb4AMQ/pdb
- Classification: TRANSFERASE
- Organism(s): Acanthamoeba polyphaga mimivirus
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2012-03-13 Released: 2013-03-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.17 Å
- R-Value Free: 0.244
- R-Value Work: 0.219
- R-Value Observed: 0.221
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| L544 | 407 | Acanthamoeba polyphaga mimivirus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q5UQA5 (Acanthamoeba polyphaga mimivirus) Explore Q5UQA5 Go to UniProtKB: Q5UQA5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5UQA5 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MN Query on MN | B [auth A], C [auth A] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |  | ||
| MG Query on MG | D [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.17 Å
- R-Value Free: 0.244
- R-Value Work: 0.219
- R-Value Observed: 0.221
- Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 60.445 | α = 90 |
| b = 91.092 | β = 90 |
| c = 152.994 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| MOSFLM | data reduction |
| SCALA | data scaling |
| autoSHARP | phasing |
Entry History
Deposition Data
- Released Date: 2013-03-20 Deposition Author(s): Lartigue, A., Claverie, J.M., Priet, S., Abergel, C.
Revision History (Full details and data files)
- Version 1.0: 2013-03-20
Type: Initial release
