Structure Validation and Quality

MolProbity Structure validation on client-uploaded or PDB ID-specified files, using all-atom contact analysis tools and updated geometrical criteria for phi/psi, sidechain rotamer, and Cbeta deviation NQ-Flipper NQ-Flipper recognizes unfavorable rotamers of Asn and Gln residues in protein structures obtained from X-ray crystallography, NMR or modelling studies. Procheck A program that checks the stereochemical quality of a protein structure

Prosa-web Quality scores of a protein are displayed in the context of all known protein structures and problematic parts of a structure are shown and highlighted in a 3D molecule viewer. Uppsala Electron Density Server Generated density maps Verify3D Structure Evaluation Server WHAT_CHECK A system for protein structure validation derived from the WHAT IF program WHAT IF A protein structure analysis program that may be used for mutant prediction, structure verification and molecular graphics

Please report any encountered broken links to info@rcsb.org.