0.015710
0.003635
0.005781
0.000000
0.016070
0.004555
0.000000
0.000000
0.010300
0.000000
0.000000
0.000000
Gong, P.
Peersen, O.B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
101.080
106.220
103.030
63.654
63.870
105.095
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
R
C
N
12
N
O
N
13
R
C
Y
14
N
N
Y
15
N
C
Y
16
N
N
Y
17
N
C
Y
18
N
C
N
19
N
N
Y
20
N
N
Y
21
N
C
Y
22
N
N
Y
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
N
N
39
S
C
N
40
N
C
N
41
N
O
N
42
N
C
N
43
N
O
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
N
N
52
S
C
N
53
N
C
N
54
N
O
N
55
N
C
N
56
N
C
N
57
N
C
N
58
N
N
N
59
N
C
N
60
N
N
N
61
N
N
N
62
N
O
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
N
N
79
S
C
N
80
N
C
N
81
N
O
N
82
N
C
N
83
N
C
N
84
N
O
N
85
N
N
N
86
N
O
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
O
N
112
N
P
N
113
N
O
N
114
N
O
N
115
N
O
N
116
N
C
N
117
R
C
N
118
N
O
N
119
S
C
N
120
N
O
N
121
R
C
N
122
N
O
N
123
R
C
N
124
N
N
N
125
N
C
N
126
N
O
N
127
N
N
N
128
N
C
N
129
N
N
N
130
N
C
N
131
N
C
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
N
N
147
R
C
N
148
N
C
N
149
N
O
N
150
N
C
N
151
N
S
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
O
N
161
N
P
N
162
N
O
N
163
N
O
N
164
N
O
N
165
N
C
N
166
R
C
N
167
N
O
N
168
S
C
N
169
N
O
N
170
R
C
N
171
N
O
N
172
R
C
Y
173
N
N
Y
174
N
C
Y
175
N
N
Y
176
N
C
N
177
N
C
N
178
N
O
N
179
N
N
N
180
N
C
N
181
N
N
N
182
N
N
Y
183
N
C
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
N
N
199
S
C
N
200
N
C
N
201
N
O
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
N
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
N
N
219
S
C
N
220
N
C
N
221
N
O
N
222
N
C
N
223
N
C
N
224
N
C
N
225
N
O
N
226
N
O
N
227
N
O
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
N
C
N
239
N
C
N
240
N
O
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
N
Y
254
N
C
Y
255
N
C
Y
256
N
N
N
257
N
O
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
O
N
269
N
H
N
270
N
H
N
271
N
N
N
272
S
C
N
273
N
C
N
274
N
O
N
275
S
C
N
276
N
C
N
277
N
C
N
278
N
C
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
N
N
294
S
C
N
295
N
C
N
296
N
O
N
297
N
C
N
298
N
C
N
299
N
C
N
300
N
C
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
S
C
N
317
N
C
N
318
N
O
N
319
N
C
N
320
N
C
N
321
N
C
N
322
N
C
N
323
N
N
N
324
N
O
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
N
C
N
345
N
C
N
346
N
S
N
347
N
C
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
N
N
361
S
C
N
362
N
C
N
363
N
O
N
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
N
N
384
S
C
N
385
N
C
N
386
N
O
N
387
N
C
N
388
N
C
N
389
N
C
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
N
N
401
S
C
N
402
N
C
N
403
N
O
N
404
N
C
N
405
N
O
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
S
N
415
N
O
N
416
N
O
N
417
N
O
N
418
N
O
N
419
N
N
N
420
S
C
N
421
N
C
N
422
N
O
N
423
R
C
N
424
N
O
N
425
N
C
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
N
N
437
S
C
N
438
N
C
N
439
N
O
N
440
N
C
Y
441
N
C
Y
442
N
C
Y
443
N
C
Y
444
N
N
Y
445
N
C
Y
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
N
450
N
O
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
N
N
464
S
C
N
465
N
C
N
466
N
O
N
467
N
C
Y
468
N
C
Y
469
N
C
Y
470
N
C
Y
471
N
C
Y
472
N
C
Y
473
N
C
N
474
N
O
N
475
N
O
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
O
N
488
N
P
N
489
N
O
N
490
N
O
N
491
N
O
N
492
N
C
N
493
R
C
N
494
N
O
N
495
S
C
N
496
N
O
N
497
R
C
N
498
N
O
N
499
R
C
N
500
N
N
N
501
N
C
N
502
N
O
N
503
N
N
N
504
N
C
N
505
N
O
N
506
N
C
N
507
N
C
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
N
N
522
S
C
N
523
N
C
N
524
N
O
N
525
N
C
N
526
N
C
N
527
N
C
N
528
N
O
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
H
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
H
N
538
N
H
N
539
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
Y
25
N
sing
Y
26
N
sing
Y
27
N
doub
N
28
N
sing
Y
29
N
sing
Y
30
N
sing
Y
31
N
doub
N
32
N
sing
Y
33
N
doub
N
34
N
sing
N
35
N
sing
Y
36
N
sing
Y
37
N
doub
N
38
N
sing
Y
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
doub
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
doub
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
Y
182
N
sing
Y
183
N
sing
Y
184
N
doub
N
185
N
sing
Y
186
N
sing
N
187
N
sing
Y
188
N
doub
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
doub
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
doub
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
Y
255
N
sing
Y
256
N
doub
Y
257
N
doub
N
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
Y
363
N
doub
Y
364
N
sing
Y
365
N
sing
N
366
N
sing
Y
367
N
doub
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
doub
N
406
N
doub
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
doub
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
Y
436
N
doub
Y
437
N
sing
Y
438
N
sing
N
439
N
sing
Y
440
N
doub
Y
441
N
sing
Y
442
N
sing
N
443
N
sing
Y
444
N
sing
Y
445
N
doub
N
446
N
sing
Y
447
N
doub
N
448
N
sing
Y
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
doub
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
Y
464
N
doub
Y
465
N
sing
Y
466
N
sing
N
467
N
sing
Y
468
N
doub
N
469
N
sing
Y
470
N
doub
N
471
N
sing
Y
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
doub
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
doub
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
doub
N
508
N
sing
N
509
N
doub
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
doub
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
US
Plos One
1932-6203
8
e60272
e60272
10.1371/journal.pone.0060272
23667424
Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts.
2013
10.2210/pdb4k4u/pdb
pdb_00004k4u
100
1
CCD
NOIR-1
SINGLE WAVELENGTH
M
x-ray
1
1.00
1.0
4.2.2
ALS
1.00
SYNCHROTRON
ALS BEAMLINE 4.2.2
53789.250
RNA-directed RNA polymerase 3D-POL
2.7.7.48
unp residues 1749-2209
L446D, C290M
2
man
polymer
8240.921
RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3')
2
syn
polymer
5201.168
RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*A)-3')
2
syn
polymer
3665.266
RNA (5'-R(P*GP*GP*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')
2
syn
polymer
96.063
SULFATE ION
4
syn
non-polymer
18.015
water
57
nat
water
no
no
GEIQWMRPSKEVGYPIINAPSKTKLEPSAFHYVFEGVKEPAVLTKNDPRLKTDFEEAIFSKYVGNKITEVDEYMKEAVDH
YAGQLMSLDINTEQMCLEDAMYGTDGLEALDLSTSAGYPYVAMGKKKRDILNKQTRDTKEMQKLLDTYGINLPLVTYVKD
ELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWSKIPVLMEEKLFAFDYTGYDAS
LSPAWFEALKMVLEKIGFGDRVDYIDYLNHSHHLYKNKTYCVKGGMPSGMSGTSIFNSMINNLIIRTLLLKTYKGIDLDH
LKMIAYGDDVIASYPHEVDASLLAQSGKDYGLTMTPADKSATFETVTWENVTFLKRFFRADEKYPFLIHPVMPMKEIHES
IRWTKDPRNTQDHVRSLCLLAWHNGEEEYNKFLAKIRSVPIGRALDLPEYSTLYRRWLDSFGSSSHHHHHH
GEIQWMRPSKEVGYPIINAPSKTKLEPSAFHYVFEGVKEPAVLTKNDPRLKTDFEEAIFSKYVGNKITEVDEYMKEAVDH
YAGQLMSLDINTEQMCLEDAMYGTDGLEALDLSTSAGYPYVAMGKKKRDILNKQTRDTKEMQKLLDTYGINLPLVTYVKD
ELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWSKIPVLMEEKLFAFDYTGYDAS
LSPAWFEALKMVLEKIGFGDRVDYIDYLNHSHHLYKNKTYCVKGGMPSGMSGTSIFNSMINNLIIRTLLLKTYKGIDLDH
LKMIAYGDDVIASYPHEVDASLLAQSGKDYGLTMTPADKSATFETVTWENVTFLKRFFRADEKYPFLIHPVMPMKEIHES
IRWTKDPRNTQDHVRSLCLLAWHNGEEEYNKFLAKIRSVPIGRALDLPEYSTLYRRWLDSFGSSSHHHHHH
A,E
polypeptide(L)
no
no
AAGUCUCCAGGUCUCUCUCGUCGAAA
AAGUCUCCAGGUCUCUCUCGUCGAAA
B,F
polyribonucleotide
no
no
UGUUCGACGAGAGAGA
UGUUCGACGAGAGAGA
C,G
polyribonucleotide
no
no
GGGGGAGAUGA
GGGGGAGAUGA
H,D
polyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Mahoney
sample
12081
Human poliovirus 1
562
Escherichia coli
1
2.71
54.65
VAPOR DIFFUSION, SITTING DROP
4.8%(v/v) isopropanol, 0.096 M tacsimate (Hampton Research), pH 8.5-9.0, 1.92-1.95 M ammonium sulfate, and 10-11%(v/v) glycerol and then gradually exchanged into a cryo stabilizer solution containing 4.8%(v/v) isopropanol, 0.096 M tacsimate, 1.95 M ammonium sulfate and 19-27%(v/v) xylitol prior to freezing, VAPOR DIFFUSION, SITTING DROP, temperature 289K
8.5-9.0
289
2.226
1
B
597
D
805
11.538
B_C597:G805_D
1
18.789
2.119
0.888
-0.776
-12.961
B
601
C
701
6.250
B_U601:A701_C
2
-16.974
-0.403
0.744
0.378
9.545
1
19
B
602
C
700
2.764
B_C602:G700_C
3
-18.916
0.121
0.174
0.210
-1.882
1
20
B
603
C
699
-3.898
B_U603:A699_C
4
-8.272
-0.241
0.548
-0.016
4.688
1
19
B
604
C
698
-4.818
B_C604:G698_C
5
-8.813
-0.232
-0.109
-0.210
6.987
1
20
B
605
C
697
-4.599
B_U605:A697_C
6
-7.139
-0.250
0.151
-0.036
9.670
1
19
B
606
C
696
1.515
B_C606:G696_C
7
-11.879
0.793
0.084
0.118
5.484
1
20
B
607
C
695
-4.739
B_U607:A695_C
8
-16.681
0.092
0.249
0.163
13.990
1
19
B
608
C
694
-2.190
B_C608:G694_C
9
-11.716
-0.244
-0.102
0.022
2.034
1
B
609
C
693
4.583
B_G609:C693_C
10
-16.989
-0.581
0.096
0.191
-5.531
1
20
B
610
C
692
-2.895
B_U610:A692_C
11
-18.476
-0.140
0.352
-0.079
3.406
1
19
B
611
C
691
-9.263
B_C611:G691_C
12
-9.860
-0.517
0.122
0.154
-1.706
1
19
B
612
C
690
9.647
B_G612:C690_C
13
-11.948
-0.730
0.405
-0.075
-6.889
1
20
B
613
C
689
-0.986
B_A613:U689_C
14
-9.952
0.900
0.182
-0.378
0.685
F
597
H
805
8.996
F_C597:G805_H
15
20.260
2.474
0.922
-0.850
-12.852
F
601
G
701
5.384
F_U601:A701_G
16
-17.352
-0.472
0.835
0.380
6.699
1
19
F
602
G
700
0.410
F_C602:G700_G
17
-12.088
0.047
0.235
0.113
0.234
1
20
F
603
G
699
-3.766
F_U603:A699_G
18
-8.147
-0.408
0.493
-0.043
5.207
1
19
F
604
G
698
-4.041
F_C604:G698_G
19
-11.705
-0.069
-0.139
-0.189
5.480
1
20
F
605
G
697
-4.986
F_U605:A697_G
20
-6.494
-0.251
0.243
-0.018
8.814
1
19
F
606
G
696
1.466
F_C606:G696_G
21
-9.393
0.794
0.096
0.062
8.197
1
20
F
607
G
695
-3.700
F_U607:A695_G
22
-17.541
0.126
0.259
0.174
13.110
1
19
F
608
G
694
-2.520
F_C608:G694_G
23
-13.225
-0.181
-0.084
0.033
-0.261
1
19
F
609
G
693
4.135
F_G609:C693_G
24
-16.325
-0.561
0.154
0.214
-7.544
1
20
F
610
G
692
-4.557
F_U610:A692_G
25
-18.358
-0.161
0.275
-0.056
0.146
1
19
F
611
G
691
-8.235
F_C611:G691_G
26
-9.316
-0.589
0.227
0.244
-2.121
1
19
F
612
G
690
9.935
F_G612:C690_G
27
-13.062
-0.647
0.372
0.044
-5.910
1
20
F
613
G
689
-0.125
F_A613:U689_G
28
-9.130
1.097
0.236
-0.289
2.259
30.148
B
B
601
602
12.642
C
C
701
700
2.624
6.515
0.184
-1.471
BB_U601C602:G700A701_CC
1
2.984
-5.790
29.303
-3.834
0.107
3.250
33.480
B
B
602
603
12.096
C
C
700
699
3.567
6.901
-0.329
-1.280
BB_C602U603:A699G700_CC
2
-4.425
7.755
32.489
-3.425
-0.200
2.855
31.542
B
B
603
604
10.025
C
C
699
698
3.160
5.398
-0.037
-1.253
BB_U603C604:G698A699_CC
3
5.378
-9.987
30.631
-3.243
1.002
2.927
33.974
B
B
604
605
10.601
C
C
698
697
3.251
6.160
0.478
-1.407
BB_C604U605:A697G698_CC
4
-1.598
2.749
33.390
-3.347
-1.062
3.070
34.514
B
B
605
606
5.845
C
C
697
696
3.216
3.462
-0.060
-1.349
BB_U605C606:G696A697_CC
5
-0.848
1.432
34.335
-2.791
-0.026
3.212
30.580
B
B
606
607
4.421
C
C
696
695
3.337
2.328
-0.483
-1.867
BB_C606U607:A695G696_CC
6
-1.870
3.550
30.437
-4.003
0.545
3.130
32.045
B
B
607
608
-0.957
C
C
695
694
3.093
-0.528
0.409
-1.866
BB_U607C608:G694A695_CC
7
0.573
-1.038
32.036
-3.290
-0.643
2.489
33.389
B
B
608
609
22.980
C
C
694
693
3.352
12.870
0.455
-1.697
BB_C608G609:C693G694_CC
8
2.182
-3.896
30.799
-4.940
-0.455
2.998
33.099
B
B
609
610
12.033
C
C
693
692
3.358
6.793
-0.449
-1.610
BB_G609U610:A692C693_CC
9
-4.028
7.135
32.169
-3.957
0.118
2.643
32.518
B
B
610
611
7.803
C
C
692
691
2.836
4.356
-0.112
-1.282
BB_U610C611:G691A692_CC
10
0.422
-0.756
32.230
-2.930
0.263
2.544
31.361
B
B
611
612
14.637
C
C
691
690
3.179
7.832
1.030
-2.142
BB_C611G612:C690G691_CC
11
-0.522
0.975
30.387
-5.274
-1.994
2.792
40.338
B
B
612
613
13.118
C
C
690
689
3.255
8.967
-0.295
-1.661
BB_G612A613:U689C690_CC
12
3.320
-4.857
39.234
-3.357
0.779
2.381
30.878
F
F
601
602
11.746
G
G
701
700
2.732
6.211
0.109
-1.522
FF_U601C602:G700A701_GG
13
1.596
-3.019
30.221
-3.811
0.041
3.051
31.426
F
F
602
603
11.373
G
G
700
699
3.359
6.112
-0.331
-1.381
FF_C602U603:A699G700_GG
14
-3.253
6.054
30.673
-3.686
0.007
2.971
33.152
F
F
603
604
9.488
G
G
699
698
3.240
5.364
0.000
-1.143
FF_U603C604:G698A699_GG
15
5.819
-10.292
32.220
-2.873
0.943
2.931
33.466
F
F
604
605
11.752
G
G
698
697
3.316
6.712
0.396
-1.352
FF_C604U605:A697G698_GG
16
-3.481
6.095
32.625
-3.420
-1.243
3.032
35.466
F
F
605
606
4.846
G
G
697
696
3.152
2.949
-0.126
-1.394
FF_U605C606:G696A697_GG
17
-1.074
1.766
35.332
-2.697
0.057
3.244
29.657
F
F
606
607
0.567
G
G
696
695
3.251
0.290
-0.320
-1.878
FF_C606U607:A695G696_GG
18
-1.365
2.667
29.625
-3.729
0.340
3.074
32.786
F
F
607
608
2.590
G
G
695
694
3.152
1.461
0.277
-1.851
FF_U607C608:G694A695_GG
19
0.755
-1.337
32.746
-3.519
-0.367
2.555
33.504
F
F
608
609
22.187
G
G
694
693
3.413
12.495
0.422
-1.751
FF_C608G609:C693G694_GG
20
1.212
-2.152
31.126
-4.988
-0.542
3.113
32.381
F
F
609
610
9.911
G
G
693
692
3.396
5.492
-0.578
-1.670
FF_G609U610:A692C693_GG
21
-3.298
5.951
31.757
-3.969
0.452
2.580
31.894
F
F
610
611
10.460
G
G
692
691
2.856
5.718
0.000
-1.326
FF_U610C611:G691A692_GG
22
-0.572
1.047
31.385
-3.284
-0.088
2.585
32.084
F
F
611
612
12.343
G
G
691
690
3.082
6.773
0.990
-2.105
FF_C611G612:C690G691_GG
23
0.092
-0.168
31.379
-4.875
-1.778
2.743
39.899
F
F
612
613
13.169
G
G
690
689
3.180
8.911
-0.287
-1.583
FF_G612A613:U689C690_GG
24
2.456
-3.630
38.856
-3.264
0.681
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
1
0
2013-05-22
1
1
2013-07-03
1
2
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2013-04-12
REL
REL
SO4
SULFATE ION
HOH
water
SO4
101
5
SO4
SO4
501
A
SO4
102
5
SO4
SO4
502
A
SO4
103
5
SO4
SO4
501
E
SO4
104
5
SO4
SO4
502
E
HOH
2
6
HOH
HOH
601
A
HOH
6
6
HOH
HOH
602
A
HOH
7
6
HOH
HOH
603
A
HOH
13
6
HOH
HOH
604
A
HOH
15
6
HOH
HOH
605
A
HOH
18
6
HOH
HOH
606
A
HOH
19
6
HOH
HOH
607
A
HOH
20
6
HOH
HOH
608
A
HOH
21
6
HOH
HOH
609
A
HOH
22
6
HOH
HOH
610
A
HOH
23
6
HOH
HOH
611
A
HOH
25
6
HOH
HOH
612
A
HOH
26
6
HOH
HOH
613
A
HOH
27
6
HOH
HOH
614
A
HOH
28
6
HOH
HOH
615
A
HOH
29
6
HOH
HOH
616
A
HOH
51
6
HOH
HOH
617
A
HOH
52
6
HOH
HOH
618
A
HOH
63
6
HOH
HOH
619
A
HOH
64
6
HOH
HOH
620
A
HOH
65
6
HOH
HOH
621
A
HOH
66
6
HOH
HOH
622
A
HOH
67
6
HOH
HOH
623
A
HOH
68
6
HOH
HOH
624
A
HOH
69
6
HOH
HOH
625
A
HOH
38
6
HOH
HOH
701
B
HOH
39
6
HOH
HOH
702
B
HOH
49
6
HOH
HOH
703
B
HOH
9
6
HOH
HOH
801
C
HOH
12
6
HOH
HOH
802
C
HOH
50
6
HOH
HOH
803
C
HOH
1
6
HOH
HOH
601
E
HOH
3
6
HOH
HOH
602
E
HOH
5
6
HOH
HOH
603
E
HOH
8
6
HOH
HOH
604
E
HOH
14
6
HOH
HOH
605
E
HOH
30
6
HOH
HOH
606
E
HOH
32
6
HOH
HOH
607
E
HOH
40
6
HOH
HOH
608
E
HOH
41
6
HOH
HOH
609
E
HOH
42
6
HOH
HOH
610
E
HOH
43
6
HOH
HOH
611
E
HOH
45
6
HOH
HOH
612
E
HOH
46
6
HOH
HOH
613
E
HOH
47
6
HOH
HOH
614
E
HOH
62
6
HOH
HOH
615
E
HOH
71
6
HOH
HOH
616
E
HOH
31
6
HOH
HOH
701
F
HOH
35
6
HOH
HOH
702
F
HOH
37
6
HOH
HOH
703
F
HOH
61
6
HOH
HOH
704
F
HOH
10
6
HOH
HOH
801
G
HOH
11
6
HOH
HOH
802
G
HOH
33
6
HOH
HOH
803
G
HOH
34
6
HOH
HOH
804
G
HOH
36
6
HOH
HOH
805
G
HOH
70
6
HOH
HOH
806
G
GLY
1
n
1
GLY
1
A
GLU
2
n
2
GLU
2
A
ILE
3
n
3
ILE
3
A
GLN
4
n
4
GLN
4
A
TRP
5
n
5
TRP
5
A
MET
6
n
6
MET
6
A
ARG
7
n
7
ARG
7
A
PRO
8
n
8
PRO
8
A
SER
9
n
9
SER
9
A
LYS
10
n
10
LYS
10
A
GLU
11
n
11
GLU
11
A
VAL
12
n
12
VAL
12
A
GLY
13
n
13
GLY
13
A
TYR
14
n
14
TYR
14
A
PRO
15
n
15
PRO
15
A
ILE
16
n
16
ILE
16
A
ILE
17
n
17
ILE
17
A
ASN
18
n
18
ASN
18
A
ALA
19
n
19
ALA
19
A
PRO
20
n
20
PRO
20
A
SER
21
n
21
SER
21
A
LYS
22
n
22
LYS
22
A
THR
23
n
23
THR
23
A
LYS
24
n
24
LYS
24
A
LEU
25
n
25
LEU
25
A
GLU
26
n
26
GLU
26
A
PRO
27
n
27
PRO
27
A
SER
28
n
28
SER
28
A
ALA
29
n
29
ALA
29
A
PHE
30
n
30
PHE
30
A
HIS
31
n
31
HIS
31
A
TYR
32
n
32
TYR
32
A
VAL
33
n
33
VAL
33
A
PHE
34
n
34
PHE
34
A
GLU
35
n
35
GLU
35
A
GLY
36
n
36
GLY
36
A
VAL
37
n
37
VAL
37
A
LYS
38
n
38
LYS
38
A
GLU
39
n
39
GLU
39
A
PRO
40
n
40
PRO
40
A
ALA
41
n
41
ALA
41
A
VAL
42
n
42
VAL
42
A
LEU
43
n
43
LEU
43
A
THR
44
n
44
THR
44
A
LYS
45
n
45
LYS
45
A
ASN
46
n
46
ASN
46
A
ASP
47
n
47
ASP
47
A
PRO
48
n
48
PRO
48
A
ARG
49
n
49
ARG
49
A
LEU
50
n
50
LEU
50
A
LYS
51
n
51
LYS
51
A
THR
52
n
52
THR
52
A
ASP
53
n
53
ASP
53
A
PHE
54
n
54
PHE
54
A
GLU
55
n
55
GLU
55
A
GLU
56
n
56
GLU
56
A
ALA
57
n
57
ALA
57
A
ILE
58
n
58
ILE
58
A
PHE
59
n
59
PHE
59
A
SER
60
n
60
SER
60
A
LYS
61
n
61
LYS
61
A
TYR
62
n
62
TYR
62
A
VAL
63
n
63
VAL
63
A
GLY
64
n
64
GLY
64
A
ASN
65
n
65
ASN
65
A
LYS
66
n
66
LYS
66
A
ILE
67
n
67
ILE
67
A
THR
68
n
68
THR
68
A
GLU
69
n
69
GLU
69
A
VAL
70
n
70
VAL
70
A
ASP
71
n
71
ASP
71
A
GLU
72
n
72
GLU
72
A
TYR
73
n
73
TYR
73
A
MET
74
n
74
MET
74
A
LYS
75
n
75
LYS
75
A
GLU
76
n
76
GLU
76
A
ALA
77
n
77
ALA
77
A
VAL
78
n
78
VAL
78
A
ASP
79
n
79
ASP
79
A
HIS
80
n
80
HIS
80
A
TYR
81
n
81
TYR
81
A
ALA
82
n
82
ALA
82
A
GLY
83
n
83
GLY
83
A
GLN
84
n
84
GLN
84
A
LEU
85
n
85
LEU
85
A
MET
86
n
86
MET
86
A
SER
87
n
87
SER
87
A
LEU
88
n
88
LEU
88
A
ASP
89
n
89
ASP
89
A
ILE
90
n
90
ILE
90
A
ASN
91
n
91
ASN
91
A
THR
92
n
92
THR
92
A
GLU
93
n
93
GLU
93
A
GLN
94
n
94
GLN
94
A
MET
95
n
95
MET
95
A
CYS
96
n
96
CYS
96
A
LEU
97
n
97
LEU
97
A
GLU
98
n
98
GLU
98
A
ASP
99
n
99
ASP
99
A
ALA
100
n
100
ALA
100
A
MET
101
n
101
MET
101
A
TYR
102
n
102
TYR
102
A
GLY
103
n
103
GLY
103
A
THR
104
n
104
THR
104
A
ASP
105
n
105
ASP
105
A
GLY
106
n
106
GLY
106
A
LEU
107
n
107
LEU
107
A
GLU
108
n
108
GLU
108
A
ALA
109
n
109
ALA
109
A
LEU
110
n
110
LEU
110
A
ASP
111
n
111
ASP
111
A
LEU
112
n
112
LEU
112
A
SER
113
n
113
SER
113
A
THR
114
n
114
THR
114
A
SER
115
n
115
SER
115
A
ALA
116
n
116
ALA
116
A
GLY
117
n
117
GLY
117
A
TYR
118
n
118
TYR
118
A
PRO
119
n
119
PRO
119
A
TYR
120
n
120
TYR
120
A
VAL
121
n
121
VAL
121
A
ALA
122
n
122
ALA
122
A
MET
123
n
123
MET
123
A
GLY
124
n
124
GLY
124
A
LYS
125
n
125
LYS
125
A
LYS
126
n
126
LYS
126
A
LYS
127
n
127
LYS
127
A
ARG
128
n
128
ARG
128
A
ASP
129
n
129
ASP
129
A
ILE
130
n
130
ILE
130
A
LEU
131
n
131
LEU
131
A
ASN
132
n
132
ASN
132
A
LYS
133
n
133
LYS
133
A
GLN
134
n
134
GLN
134
A
THR
135
n
135
THR
135
A
ARG
136
n
136
ARG
136
A
ASP
137
n
137
ASP
137
A
THR
138
n
138
THR
138
A
LYS
139
n
139
LYS
139
A
GLU
140
n
140
GLU
140
A
MET
141
n
141
MET
141
A
GLN
142
n
142
GLN
142
A
LYS
143
n
143
LYS
143
A
LEU
144
n
144
LEU
144
A
LEU
145
n
145
LEU
145
A
ASP
146
n
146
ASP
146
A
THR
147
n
147
THR
147
A
TYR
148
n
148
TYR
148
A
GLY
149
n
149
GLY
149
A
ILE
150
n
150
ILE
150
A
ASN
151
n
151
ASN
151
A
LEU
152
n
152
LEU
152
A
PRO
153
n
153
PRO
153
A
LEU
154
n
154
LEU
154
A
VAL
155
n
155
VAL
155
A
THR
156
n
156
THR
156
A
TYR
157
n
157
TYR
157
A
VAL
158
n
158
VAL
158
A
LYS
159
n
159
LYS
159
A
ASP
160
n
160
ASP
160
A
GLU
161
n
161
GLU
161
A
LEU
162
n
162
LEU
162
A
ARG
163
n
163
ARG
163
A
SER
164
n
164
SER
164
A
LYS
165
n
165
LYS
165
A
THR
166
n
166
THR
166
A
LYS
167
n
167
LYS
167
A
VAL
168
n
168
VAL
168
A
GLU
169
n
169
GLU
169
A
GLN
170
n
170
GLN
170
A
GLY
171
n
171
GLY
171
A
LYS
172
n
172
LYS
172
A
SER
173
n
173
SER
173
A
ARG
174
n
174
ARG
174
A
LEU
175
n
175
LEU
175
A
ILE
176
n
176
ILE
176
A
GLU
177
n
177
GLU
177
A
ALA
178
n
178
ALA
178
A
SER
179
n
179
SER
179
A
SER
180
n
180
SER
180
A
LEU
181
n
181
LEU
181
A
ASN
182
n
182
ASN
182
A
ASP
183
n
183
ASP
183
A
SER
184
n
184
SER
184
A
VAL
185
n
185
VAL
185
A
ALA
186
n
186
ALA
186
A
MET
187
n
187
MET
187
A
ARG
188
n
188
ARG
188
A
MET
189
n
189
MET
189
A
ALA
190
n
190
ALA
190
A
PHE
191
n
191
PHE
191
A
GLY
192
n
192
GLY
192
A
ASN
193
n
193
ASN
193
A
LEU
194
n
194
LEU
194
A
TYR
195
n
195
TYR
195
A
ALA
196
n
196
ALA
196
A
ALA
197
n
197
ALA
197
A
PHE
198
n
198
PHE
198
A
HIS
199
n
199
HIS
199
A
LYS
200
n
200
LYS
200
A
ASN
201
n
201
ASN
201
A
PRO
202
n
202
PRO
202
A
GLY
203
n
203
GLY
203
A
VAL
204
n
204
VAL
204
A
ILE
205
n
205
ILE
205
A
THR
206
n
206
THR
206
A
GLY
207
n
207
GLY
207
A
SER
208
n
208
SER
208
A
ALA
209
n
209
ALA
209
A
VAL
210
n
210
VAL
210
A
GLY
211
n
211
GLY
211
A
CYS
212
n
212
CYS
212
A
ASP
213
n
213
ASP
213
A
PRO
214
n
214
PRO
214
A
ASP
215
n
215
ASP
215
A
LEU
216
n
216
LEU
216
A
PHE
217
n
217
PHE
217
A
TRP
218
n
218
TRP
218
A
SER
219
n
219
SER
219
A
LYS
220
n
220
LYS
220
A
ILE
221
n
221
ILE
221
A
PRO
222
n
222
PRO
222
A
VAL
223
n
223
VAL
223
A
LEU
224
n
224
LEU
224
A
MET
225
n
225
MET
225
A
GLU
226
n
226
GLU
226
A
GLU
227
n
227
GLU
227
A
LYS
228
n
228
LYS
228
A
LEU
229
n
229
LEU
229
A
PHE
230
n
230
PHE
230
A
ALA
231
n
231
ALA
231
A
PHE
232
n
232
PHE
232
A
ASP
233
n
233
ASP
233
A
TYR
234
n
234
TYR
234
A
THR
235
n
235
THR
235
A
GLY
236
n
236
GLY
236
A
TYR
237
n
237
TYR
237
A
ASP
238
n
238
ASP
238
A
ALA
239
n
239
ALA
239
A
SER
240
n
240
SER
240
A
LEU
241
n
241
LEU
241
A
SER
242
n
242
SER
242
A
PRO
243
n
243
PRO
243
A
ALA
244
n
244
ALA
244
A
TRP
245
n
245
TRP
245
A
PHE
246
n
246
PHE
246
A
GLU
247
n
247
GLU
247
A
ALA
248
n
248
ALA
248
A
LEU
249
n
249
LEU
249
A
LYS
250
n
250
LYS
250
A
MET
251
n
251
MET
251
A
VAL
252
n
252
VAL
252
A
LEU
253
n
253
LEU
253
A
GLU
254
n
254
GLU
254
A
LYS
255
n
255
LYS
255
A
ILE
256
n
256
ILE
256
A
GLY
257
n
257
GLY
257
A
PHE
258
n
258
PHE
258
A
GLY
259
n
259
GLY
259
A
ASP
260
n
260
ASP
260
A
ARG
261
n
261
ARG
261
A
VAL
262
n
262
VAL
262
A
ASP
263
n
263
ASP
263
A
TYR
264
n
264
TYR
264
A
ILE
265
n
265
ILE
265
A
ASP
266
n
266
ASP
266
A
TYR
267
n
267
TYR
267
A
LEU
268
n
268
LEU
268
A
ASN
269
n
269
ASN
269
A
HIS
270
n
270
HIS
270
A
SER
271
n
271
SER
271
A
HIS
272
n
272
HIS
272
A
HIS
273
n
273
HIS
273
A
LEU
274
n
274
LEU
274
A
TYR
275
n
275
TYR
275
A
LYS
276
n
276
LYS
276
A
ASN
277
n
277
ASN
277
A
LYS
278
n
278
LYS
278
A
THR
279
n
279
THR
279
A
TYR
280
n
280
TYR
280
A
CYS
281
n
281
CYS
281
A
VAL
282
n
282
VAL
282
A
LYS
283
n
283
LYS
283
A
GLY
284
n
284
GLY
284
A
GLY
285
n
285
GLY
285
A
MET
286
n
286
MET
286
A
PRO
287
n
287
PRO
287
A
SER
288
n
288
SER
288
A
GLY
289
n
289
GLY
289
A
MET
290
n
290
MET
290
A
SER
291
n
291
SER
291
A
GLY
292
n
292
GLY
292
A
THR
293
n
293
THR
293
A
SER
294
n
294
SER
294
A
ILE
295
n
295
ILE
295
A
PHE
296
n
296
PHE
296
A
ASN
297
n
297
ASN
297
A
SER
298
n
298
SER
298
A
MET
299
n
299
MET
299
A
ILE
300
n
300
ILE
300
A
ASN
301
n
301
ASN
301
A
ASN
302
n
302
ASN
302
A
LEU
303
n
303
LEU
303
A
ILE
304
n
304
ILE
304
A
ILE
305
n
305
ILE
305
A
ARG
306
n
306
ARG
306
A
THR
307
n
307
THR
307
A
LEU
308
n
308
LEU
308
A
LEU
309
n
309
LEU
309
A
LEU
310
n
310
LEU
310
A
LYS
311
n
311
LYS
311
A
THR
312
n
312
THR
312
A
TYR
313
n
313
TYR
313
A
LYS
314
n
314
LYS
314
A
GLY
315
n
315
GLY
315
A
ILE
316
n
316
ILE
316
A
ASP
317
n
317
ASP
317
A
LEU
318
n
318
LEU
318
A
ASP
319
n
319
ASP
319
A
HIS
320
n
320
HIS
320
A
LEU
321
n
321
LEU
321
A
LYS
322
n
322
LYS
322
A
MET
323
n
323
MET
323
A
ILE
324
n
324
ILE
324
A
ALA
325
n
325
ALA
325
A
TYR
326
n
326
TYR
326
A
GLY
327
n
327
GLY
327
A
ASP
328
n
328
ASP
328
A
ASP
329
n
329
ASP
329
A
VAL
330
n
330
VAL
330
A
ILE
331
n
331
ILE
331
A
ALA
332
n
332
ALA
332
A
SER
333
n
333
SER
333
A
TYR
334
n
334
TYR
334
A
PRO
335
n
335
PRO
335
A
HIS
336
n
336
HIS
336
A
GLU
337
n
337
GLU
337
A
VAL
338
n
338
VAL
338
A
ASP
339
n
339
ASP
339
A
ALA
340
n
340
ALA
340
A
SER
341
n
341
SER
341
A
LEU
342
n
342
LEU
342
A
LEU
343
n
343
LEU
343
A
ALA
344
n
344
ALA
344
A
GLN
345
n
345
GLN
345
A
SER
346
n
346
SER
346
A
GLY
347
n
347
GLY
347
A
LYS
348
n
348
LYS
348
A
ASP
349
n
349
ASP
349
A
TYR
350
n
350
TYR
350
A
GLY
351
n
351
GLY
351
A
LEU
352
n
352
LEU
352
A
THR
353
n
353
THR
353
A
MET
354
n
354
MET
354
A
THR
355
n
355
THR
355
A
PRO
356
n
356
PRO
356
A
ALA
357
n
357
ALA
357
A
ASP
358
n
358
ASP
358
A
LYS
359
n
359
LYS
359
A
SER
360
n
360
SER
360
A
ALA
361
n
361
ALA
361
A
THR
362
n
362
THR
362
A
PHE
363
n
363
PHE
363
A
GLU
364
n
364
GLU
364
A
THR
365
n
365
THR
365
A
VAL
366
n
366
VAL
366
A
THR
367
n
367
THR
367
A
TRP
368
n
368
TRP
368
A
GLU
369
n
369
GLU
369
A
ASN
370
n
370
ASN
370
A
VAL
371
n
371
VAL
371
A
THR
372
n
372
THR
372
A
PHE
373
n
373
PHE
373
A
LEU
374
n
374
LEU
374
A
LYS
375
n
375
LYS
375
A
ARG
376
n
376
ARG
376
A
PHE
377
n
377
PHE
377
A
PHE
378
n
378
PHE
378
A
ARG
379
n
379
ARG
379
A
ALA
380
n
380
ALA
380
A
ASP
381
n
381
ASP
381
A
GLU
382
n
382
GLU
382
A
LYS
383
n
383
LYS
383
A
TYR
384
n
384
TYR
384
A
PRO
385
n
385
PRO
385
A
PHE
386
n
386
PHE
386
A
LEU
387
n
387
LEU
387
A
ILE
388
n
388
ILE
388
A
HIS
389
n
389
HIS
389
A
PRO
390
n
390
PRO
390
A
VAL
391
n
391
VAL
391
A
MET
392
n
392
MET
392
A
PRO
393
n
393
PRO
393
A
MET
394
n
394
MET
394
A
LYS
395
n
395
LYS
395
A
GLU
396
n
396
GLU
396
A
ILE
397
n
397
ILE
397
A
HIS
398
n
398
HIS
398
A
GLU
399
n
399
GLU
399
A
SER
400
n
400
SER
400
A
ILE
401
n
401
ILE
401
A
ARG
402
n
402
ARG
402
A
TRP
403
n
403
TRP
403
A
THR
404
n
404
THR
404
A
LYS
405
n
405
LYS
405
A
ASP
406
n
406
ASP
406
A
PRO
407
n
407
PRO
407
A
ARG
408
n
408
ARG
408
A
ASN
409
n
409
ASN
409
A
THR
410
n
410
THR
410
A
GLN
411
n
411
GLN
411
A
ASP
412
n
412
ASP
412
A
HIS
413
n
413
HIS
413
A
VAL
414
n
414
VAL
414
A
ARG
415
n
415
ARG
415
A
SER
416
n
416
SER
416
A
LEU
417
n
417
LEU
417
A
CYS
418
n
418
CYS
418
A
LEU
419
n
419
LEU
419
A
LEU
420
n
420
LEU
420
A
ALA
421
n
421
ALA
421
A
TRP
422
n
422
TRP
422
A
HIS
423
n
423
HIS
423
A
ASN
424
n
424
ASN
424
A
GLY
425
n
425
GLY
425
A
GLU
426
n
426
GLU
426
A
GLU
427
n
427
GLU
427
A
GLU
428
n
428
GLU
428
A
TYR
429
n
429
TYR
429
A
ASN
430
n
430
ASN
430
A
LYS
431
n
431
LYS
431
A
PHE
432
n
432
PHE
432
A
LEU
433
n
433
LEU
433
A
ALA
434
n
434
ALA
434
A
LYS
435
n
435
LYS
435
A
ILE
436
n
436
ILE
436
A
ARG
437
n
437
ARG
437
A
SER
438
n
438
SER
438
A
VAL
439
n
439
VAL
439
A
PRO
440
n
440
PRO
440
A
ILE
441
n
441
ILE
441
A
GLY
442
n
442
GLY
442
A
ARG
443
n
443
ARG
443
A
ALA
444
n
444
ALA
444
A
LEU
445
n
445
LEU
445
A
ASP
446
n
446
ASP
446
A
LEU
447
n
447
LEU
447
A
PRO
448
n
448
PRO
448
A
GLU
449
n
449
GLU
449
A
TYR
450
n
450
TYR
450
A
SER
451
n
451
SER
451
A
THR
452
n
452
THR
452
A
LEU
453
n
453
LEU
453
A
TYR
454
n
454
TYR
454
A
ARG
455
n
455
ARG
455
A
ARG
456
n
456
ARG
456
A
TRP
457
n
457
TRP
457
A
LEU
458
n
458
LEU
458
A
ASP
459
n
459
ASP
459
A
SER
460
n
460
SER
460
A
PHE
461
n
461
PHE
461
A
GLY
462
n
462
GLY
462
A
n
463
463
A
n
464
464
A
n
465
465
A
n
466
466
A
n
467
467
A
n
468
468
A
n
469
469
A
n
470
470
A
n
471
471
A
n
1
590
B
n
2
591
B
n
3
592
B
n
4
593
B
n
5
594
B
n
6
595
B
C
596
n
7
C
596
B
C
597
n
8
C
597
B
A
598
n
9
A
598
B
G
599
n
10
G
599
B
G
600
n
11
G
600
B
U
601
n
12
U
601
B
C
602
n
13
C
602
B
U
603
n
14
U
603
B
C
604
n
15
C
604
B
U
605
n
16
U
605
B
C
606
n
17
C
606
B
U
607
n
18
U
607
B
C
608
n
19
C
608
B
G
609
n
20
G
609
B
U
610
n
21
U
610
B
C
611
n
22
C
611
B
G
612
n
23
G
612
B
A
613
n
24
A
613
B
A
614
n
25
A
614
B
n
26
615
B
n
1
686
C
G
687
n
2
G
687
C
U
688
n
3
U
688
C
U
689
n
4
U
689
C
C
690
n
5
C
690
C
G
691
n
6
G
691
C
A
692
n
7
A
692
C
C
693
n
8
C
693
C
G
694
n
9
G
694
C
A
695
n
10
A
695
C
G
696
n
11
G
696
C
A
697
n
12
A
697
C
G
698
n
13
G
698
C
A
699
n
14
A
699
C
G
700
n
15
G
700
C
A
701
n
16
A
701
C
GLY
1
n
1
GLY
1
E
GLU
2
n
2
GLU
2
E
ILE
3
n
3
ILE
3
E
GLN
4
n
4
GLN
4
E
TRP
5
n
5
TRP
5
E
MET
6
n
6
MET
6
E
ARG
7
n
7
ARG
7
E
PRO
8
n
8
PRO
8
E
SER
9
n
9
SER
9
E
LYS
10
n
10
LYS
10
E
GLU
11
n
11
GLU
11
E
VAL
12
n
12
VAL
12
E
GLY
13
n
13
GLY
13
E
TYR
14
n
14
TYR
14
E
PRO
15
n
15
PRO
15
E
ILE
16
n
16
ILE
16
E
ILE
17
n
17
ILE
17
E
ASN
18
n
18
ASN
18
E
ALA
19
n
19
ALA
19
E
PRO
20
n
20
PRO
20
E
SER
21
n
21
SER
21
E
LYS
22
n
22
LYS
22
E
THR
23
n
23
THR
23
E
LYS
24
n
24
LYS
24
E
LEU
25
n
25
LEU
25
E
GLU
26
n
26
GLU
26
E
PRO
27
n
27
PRO
27
E
SER
28
n
28
SER
28
E
ALA
29
n
29
ALA
29
E
PHE
30
n
30
PHE
30
E
HIS
31
n
31
HIS
31
E
TYR
32
n
32
TYR
32
E
VAL
33
n
33
VAL
33
E
PHE
34
n
34
PHE
34
E
GLU
35
n
35
GLU
35
E
GLY
36
n
36
GLY
36
E
VAL
37
n
37
VAL
37
E
LYS
38
n
38
LYS
38
E
GLU
39
n
39
GLU
39
E
PRO
40
n
40
PRO
40
E
ALA
41
n
41
ALA
41
E
VAL
42
n
42
VAL
42
E
LEU
43
n
43
LEU
43
E
THR
44
n
44
THR
44
E
LYS
45
n
45
LYS
45
E
ASN
46
n
46
ASN
46
E
ASP
47
n
47
ASP
47
E
PRO
48
n
48
PRO
48
E
ARG
49
n
49
ARG
49
E
LEU
50
n
50
LEU
50
E
LYS
51
n
51
LYS
51
E
THR
52
n
52
THR
52
E
ASP
53
n
53
ASP
53
E
PHE
54
n
54
PHE
54
E
GLU
55
n
55
GLU
55
E
GLU
56
n
56
GLU
56
E
ALA
57
n
57
ALA
57
E
ILE
58
n
58
ILE
58
E
PHE
59
n
59
PHE
59
E
SER
60
n
60
SER
60
E
LYS
61
n
61
LYS
61
E
TYR
62
n
62
TYR
62
E
VAL
63
n
63
VAL
63
E
GLY
64
n
64
GLY
64
E
ASN
65
n
65
ASN
65
E
LYS
66
n
66
LYS
66
E
ILE
67
n
67
ILE
67
E
THR
68
n
68
THR
68
E
GLU
69
n
69
GLU
69
E
VAL
70
n
70
VAL
70
E
ASP
71
n
71
ASP
71
E
GLU
72
n
72
GLU
72
E
TYR
73
n
73
TYR
73
E
MET
74
n
74
MET
74
E
LYS
75
n
75
LYS
75
E
GLU
76
n
76
GLU
76
E
ALA
77
n
77
ALA
77
E
VAL
78
n
78
VAL
78
E
ASP
79
n
79
ASP
79
E
HIS
80
n
80
HIS
80
E
TYR
81
n
81
TYR
81
E
ALA
82
n
82
ALA
82
E
GLY
83
n
83
GLY
83
E
GLN
84
n
84
GLN
84
E
LEU
85
n
85
LEU
85
E
MET
86
n
86
MET
86
E
SER
87
n
87
SER
87
E
LEU
88
n
88
LEU
88
E
ASP
89
n
89
ASP
89
E
ILE
90
n
90
ILE
90
E
ASN
91
n
91
ASN
91
E
THR
92
n
92
THR
92
E
GLU
93
n
93
GLU
93
E
GLN
94
n
94
GLN
94
E
MET
95
n
95
MET
95
E
CYS
96
n
96
CYS
96
E
LEU
97
n
97
LEU
97
E
GLU
98
n
98
GLU
98
E
ASP
99
n
99
ASP
99
E
ALA
100
n
100
ALA
100
E
MET
101
n
101
MET
101
E
TYR
102
n
102
TYR
102
E
GLY
103
n
103
GLY
103
E
THR
104
n
104
THR
104
E
ASP
105
n
105
ASP
105
E
GLY
106
n
106
GLY
106
E
LEU
107
n
107
LEU
107
E
GLU
108
n
108
GLU
108
E
ALA
109
n
109
ALA
109
E
LEU
110
n
110
LEU
110
E
ASP
111
n
111
ASP
111
E
LEU
112
n
112
LEU
112
E
SER
113
n
113
SER
113
E
THR
114
n
114
THR
114
E
SER
115
n
115
SER
115
E
ALA
116
n
116
ALA
116
E
GLY
117
n
117
GLY
117
E
TYR
118
n
118
TYR
118
E
PRO
119
n
119
PRO
119
E
TYR
120
n
120
TYR
120
E
VAL
121
n
121
VAL
121
E
ALA
122
n
122
ALA
122
E
MET
123
n
123
MET
123
E
GLY
124
n
124
GLY
124
E
LYS
125
n
125
LYS
125
E
LYS
126
n
126
LYS
126
E
LYS
127
n
127
LYS
127
E
ARG
128
n
128
ARG
128
E
ASP
129
n
129
ASP
129
E
ILE
130
n
130
ILE
130
E
LEU
131
n
131
LEU
131
E
ASN
132
n
132
ASN
132
E
LYS
133
n
133
LYS
133
E
GLN
134
n
134
GLN
134
E
THR
135
n
135
THR
135
E
ARG
136
n
136
ARG
136
E
ASP
137
n
137
ASP
137
E
THR
138
n
138
THR
138
E
LYS
139
n
139
LYS
139
E
GLU
140
n
140
GLU
140
E
MET
141
n
141
MET
141
E
GLN
142
n
142
GLN
142
E
LYS
143
n
143
LYS
143
E
LEU
144
n
144
LEU
144
E
LEU
145
n
145
LEU
145
E
ASP
146
n
146
ASP
146
E
THR
147
n
147
THR
147
E
TYR
148
n
148
TYR
148
E
GLY
149
n
149
GLY
149
E
ILE
150
n
150
ILE
150
E
ASN
151
n
151
ASN
151
E
LEU
152
n
152
LEU
152
E
PRO
153
n
153
PRO
153
E
LEU
154
n
154
LEU
154
E
VAL
155
n
155
VAL
155
E
THR
156
n
156
THR
156
E
TYR
157
n
157
TYR
157
E
VAL
158
n
158
VAL
158
E
LYS
159
n
159
LYS
159
E
ASP
160
n
160
ASP
160
E
GLU
161
n
161
GLU
161
E
LEU
162
n
162
LEU
162
E
ARG
163
n
163
ARG
163
E
SER
164
n
164
SER
164
E
LYS
165
n
165
LYS
165
E
THR
166
n
166
THR
166
E
LYS
167
n
167
LYS
167
E
VAL
168
n
168
VAL
168
E
GLU
169
n
169
GLU
169
E
GLN
170
n
170
GLN
170
E
GLY
171
n
171
GLY
171
E
LYS
172
n
172
LYS
172
E
SER
173
n
173
SER
173
E
ARG
174
n
174
ARG
174
E
LEU
175
n
175
LEU
175
E
ILE
176
n
176
ILE
176
E
GLU
177
n
177
GLU
177
E
ALA
178
n
178
ALA
178
E
SER
179
n
179
SER
179
E
SER
180
n
180
SER
180
E
LEU
181
n
181
LEU
181
E
ASN
182
n
182
ASN
182
E
ASP
183
n
183
ASP
183
E
SER
184
n
184
SER
184
E
VAL
185
n
185
VAL
185
E
ALA
186
n
186
ALA
186
E
MET
187
n
187
MET
187
E
ARG
188
n
188
ARG
188
E
MET
189
n
189
MET
189
E
ALA
190
n
190
ALA
190
E
PHE
191
n
191
PHE
191
E
GLY
192
n
192
GLY
192
E
ASN
193
n
193
ASN
193
E
LEU
194
n
194
LEU
194
E
TYR
195
n
195
TYR
195
E
ALA
196
n
196
ALA
196
E
ALA
197
n
197
ALA
197
E
PHE
198
n
198
PHE
198
E
HIS
199
n
199
HIS
199
E
LYS
200
n
200
LYS
200
E
ASN
201
n
201
ASN
201
E
PRO
202
n
202
PRO
202
E
GLY
203
n
203
GLY
203
E
VAL
204
n
204
VAL
204
E
ILE
205
n
205
ILE
205
E
THR
206
n
206
THR
206
E
GLY
207
n
207
GLY
207
E
SER
208
n
208
SER
208
E
ALA
209
n
209
ALA
209
E
VAL
210
n
210
VAL
210
E
GLY
211
n
211
GLY
211
E
CYS
212
n
212
CYS
212
E
ASP
213
n
213
ASP
213
E
PRO
214
n
214
PRO
214
E
ASP
215
n
215
ASP
215
E
LEU
216
n
216
LEU
216
E
PHE
217
n
217
PHE
217
E
TRP
218
n
218
TRP
218
E
SER
219
n
219
SER
219
E
LYS
220
n
220
LYS
220
E
ILE
221
n
221
ILE
221
E
PRO
222
n
222
PRO
222
E
VAL
223
n
223
VAL
223
E
LEU
224
n
224
LEU
224
E
MET
225
n
225
MET
225
E
GLU
226
n
226
GLU
226
E
GLU
227
n
227
GLU
227
E
LYS
228
n
228
LYS
228
E
LEU
229
n
229
LEU
229
E
PHE
230
n
230
PHE
230
E
ALA
231
n
231
ALA
231
E
PHE
232
n
232
PHE
232
E
ASP
233
n
233
ASP
233
E
TYR
234
n
234
TYR
234
E
THR
235
n
235
THR
235
E
GLY
236
n
236
GLY
236
E
TYR
237
n
237
TYR
237
E
ASP
238
n
238
ASP
238
E
ALA
239
n
239
ALA
239
E
SER
240
n
240
SER
240
E
LEU
241
n
241
LEU
241
E
SER
242
n
242
SER
242
E
PRO
243
n
243
PRO
243
E
ALA
244
n
244
ALA
244
E
TRP
245
n
245
TRP
245
E
PHE
246
n
246
PHE
246
E
GLU
247
n
247
GLU
247
E
ALA
248
n
248
ALA
248
E
LEU
249
n
249
LEU
249
E
LYS
250
n
250
LYS
250
E
MET
251
n
251
MET
251
E
VAL
252
n
252
VAL
252
E
LEU
253
n
253
LEU
253
E
GLU
254
n
254
GLU
254
E
LYS
255
n
255
LYS
255
E
ILE
256
n
256
ILE
256
E
GLY
257
n
257
GLY
257
E
PHE
258
n
258
PHE
258
E
GLY
259
n
259
GLY
259
E
ASP
260
n
260
ASP
260
E
ARG
261
n
261
ARG
261
E
VAL
262
n
262
VAL
262
E
ASP
263
n
263
ASP
263
E
TYR
264
n
264
TYR
264
E
ILE
265
n
265
ILE
265
E
ASP
266
n
266
ASP
266
E
TYR
267
n
267
TYR
267
E
LEU
268
n
268
LEU
268
E
ASN
269
n
269
ASN
269
E
HIS
270
n
270
HIS
270
E
SER
271
n
271
SER
271
E
HIS
272
n
272
HIS
272
E
HIS
273
n
273
HIS
273
E
LEU
274
n
274
LEU
274
E
TYR
275
n
275
TYR
275
E
LYS
276
n
276
LYS
276
E
ASN
277
n
277
ASN
277
E
LYS
278
n
278
LYS
278
E
THR
279
n
279
THR
279
E
TYR
280
n
280
TYR
280
E
CYS
281
n
281
CYS
281
E
VAL
282
n
282
VAL
282
E
LYS
283
n
283
LYS
283
E
GLY
284
n
284
GLY
284
E
GLY
285
n
285
GLY
285
E
MET
286
n
286
MET
286
E
PRO
287
n
287
PRO
287
E
SER
288
n
288
SER
288
E
GLY
289
n
289
GLY
289
E
MET
290
n
290
MET
290
E
SER
291
n
291
SER
291
E
GLY
292
n
292
GLY
292
E
THR
293
n
293
THR
293
E
SER
294
n
294
SER
294
E
ILE
295
n
295
ILE
295
E
PHE
296
n
296
PHE
296
E
ASN
297
n
297
ASN
297
E
SER
298
n
298
SER
298
E
MET
299
n
299
MET
299
E
ILE
300
n
300
ILE
300
E
ASN
301
n
301
ASN
301
E
ASN
302
n
302
ASN
302
E
LEU
303
n
303
LEU
303
E
ILE
304
n
304
ILE
304
E
ILE
305
n
305
ILE
305
E
ARG
306
n
306
ARG
306
E
THR
307
n
307
THR
307
E
LEU
308
n
308
LEU
308
E
LEU
309
n
309
LEU
309
E
LEU
310
n
310
LEU
310
E
LYS
311
n
311
LYS
311
E
THR
312
n
312
THR
312
E
TYR
313
n
313
TYR
313
E
LYS
314
n
314
LYS
314
E
GLY
315
n
315
GLY
315
E
ILE
316
n
316
ILE
316
E
ASP
317
n
317
ASP
317
E
LEU
318
n
318
LEU
318
E
ASP
319
n
319
ASP
319
E
HIS
320
n
320
HIS
320
E
LEU
321
n
321
LEU
321
E
LYS
322
n
322
LYS
322
E
MET
323
n
323
MET
323
E
ILE
324
n
324
ILE
324
E
ALA
325
n
325
ALA
325
E
TYR
326
n
326
TYR
326
E
GLY
327
n
327
GLY
327
E
ASP
328
n
328
ASP
328
E
ASP
329
n
329
ASP
329
E
VAL
330
n
330
VAL
330
E
ILE
331
n
331
ILE
331
E
ALA
332
n
332
ALA
332
E
SER
333
n
333
SER
333
E
TYR
334
n
334
TYR
334
E
PRO
335
n
335
PRO
335
E
HIS
336
n
336
HIS
336
E
GLU
337
n
337
GLU
337
E
VAL
338
n
338
VAL
338
E
ASP
339
n
339
ASP
339
E
ALA
340
n
340
ALA
340
E
SER
341
n
341
SER
341
E
LEU
342
n
342
LEU
342
E
LEU
343
n
343
LEU
343
E
ALA
344
n
344
ALA
344
E
GLN
345
n
345
GLN
345
E
SER
346
n
346
SER
346
E
GLY
347
n
347
GLY
347
E
LYS
348
n
348
LYS
348
E
ASP
349
n
349
ASP
349
E
TYR
350
n
350
TYR
350
E
GLY
351
n
351
GLY
351
E
LEU
352
n
352
LEU
352
E
THR
353
n
353
THR
353
E
MET
354
n
354
MET
354
E
THR
355
n
355
THR
355
E
PRO
356
n
356
PRO
356
E
ALA
357
n
357
ALA
357
E
ASP
358
n
358
ASP
358
E
LYS
359
n
359
LYS
359
E
SER
360
n
360
SER
360
E
ALA
361
n
361
ALA
361
E
THR
362
n
362
THR
362
E
PHE
363
n
363
PHE
363
E
GLU
364
n
364
GLU
364
E
THR
365
n
365
THR
365
E
VAL
366
n
366
VAL
366
E
THR
367
n
367
THR
367
E
TRP
368
n
368
TRP
368
E
GLU
369
n
369
GLU
369
E
ASN
370
n
370
ASN
370
E
VAL
371
n
371
VAL
371
E
THR
372
n
372
THR
372
E
PHE
373
n
373
PHE
373
E
LEU
374
n
374
LEU
374
E
LYS
375
n
375
LYS
375
E
ARG
376
n
376
ARG
376
E
PHE
377
n
377
PHE
377
E
PHE
378
n
378
PHE
378
E
ARG
379
n
379
ARG
379
E
ALA
380
n
380
ALA
380
E
ASP
381
n
381
ASP
381
E
GLU
382
n
382
GLU
382
E
LYS
383
n
383
LYS
383
E
TYR
384
n
384
TYR
384
E
PRO
385
n
385
PRO
385
E
PHE
386
n
386
PHE
386
E
LEU
387
n
387
LEU
387
E
ILE
388
n
388
ILE
388
E
HIS
389
n
389
HIS
389
E
PRO
390
n
390
PRO
390
E
VAL
391
n
391
VAL
391
E
MET
392
n
392
MET
392
E
PRO
393
n
393
PRO
393
E
MET
394
n
394
MET
394
E
LYS
395
n
395
LYS
395
E
GLU
396
n
396
GLU
396
E
ILE
397
n
397
ILE
397
E
HIS
398
n
398
HIS
398
E
GLU
399
n
399
GLU
399
E
SER
400
n
400
SER
400
E
ILE
401
n
401
ILE
401
E
ARG
402
n
402
ARG
402
E
TRP
403
n
403
TRP
403
E
THR
404
n
404
THR
404
E
LYS
405
n
405
LYS
405
E
ASP
406
n
406
ASP
406
E
PRO
407
n
407
PRO
407
E
ARG
408
n
408
ARG
408
E
ASN
409
n
409
ASN
409
E
THR
410
n
410
THR
410
E
GLN
411
n
411
GLN
411
E
ASP
412
n
412
ASP
412
E
HIS
413
n
413
HIS
413
E
VAL
414
n
414
VAL
414
E
ARG
415
n
415
ARG
415
E
SER
416
n
416
SER
416
E
LEU
417
n
417
LEU
417
E
CYS
418
n
418
CYS
418
E
LEU
419
n
419
LEU
419
E
LEU
420
n
420
LEU
420
E
ALA
421
n
421
ALA
421
E
TRP
422
n
422
TRP
422
E
HIS
423
n
423
HIS
423
E
ASN
424
n
424
ASN
424
E
GLY
425
n
425
GLY
425
E
GLU
426
n
426
GLU
426
E
GLU
427
n
427
GLU
427
E
GLU
428
n
428
GLU
428
E
TYR
429
n
429
TYR
429
E
ASN
430
n
430
ASN
430
E
LYS
431
n
431
LYS
431
E
PHE
432
n
432
PHE
432
E
LEU
433
n
433
LEU
433
E
ALA
434
n
434
ALA
434
E
LYS
435
n
435
LYS
435
E
ILE
436
n
436
ILE
436
E
ARG
437
n
437
ARG
437
E
SER
438
n
438
SER
438
E
VAL
439
n
439
VAL
439
E
PRO
440
n
440
PRO
440
E
ILE
441
n
441
ILE
441
E
GLY
442
n
442
GLY
442
E
ARG
443
n
443
ARG
443
E
ALA
444
n
444
ALA
444
E
LEU
445
n
445
LEU
445
E
ASP
446
n
446
ASP
446
E
LEU
447
n
447
LEU
447
E
PRO
448
n
448
PRO
448
E
GLU
449
n
449
GLU
449
E
TYR
450
n
450
TYR
450
E
SER
451
n
451
SER
451
E
THR
452
n
452
THR
452
E
LEU
453
n
453
LEU
453
E
TYR
454
n
454
TYR
454
E
ARG
455
n
455
ARG
455
E
ARG
456
n
456
ARG
456
E
TRP
457
n
457
TRP
457
E
LEU
458
n
458
LEU
458
E
ASP
459
n
459
ASP
459
E
SER
460
n
460
SER
460
E
PHE
461
n
461
PHE
461
E
GLY
462
n
462
GLY
462
E
n
463
463
E
n
464
464
E
n
465
465
E
n
466
466
E
n
467
467
E
n
468
468
E
n
469
469
E
n
470
470
E
n
471
471
E
n
1
590
F
n
2
591
F
n
3
592
F
n
4
593
F
n
5
594
F
n
6
595
F
C
596
n
7
C
596
F
C
597
n
8
C
597
F
A
598
n
9
A
598
F
G
599
n
10
G
599
F
G
600
n
11
G
600
F
U
601
n
12
U
601
F
C
602
n
13
C
602
F
U
603
n
14
U
603
F
C
604
n
15
C
604
F
U
605
n
16
U
605
F
C
606
n
17
C
606
F
U
607
n
18
U
607
F
C
608
n
19
C
608
F
G
609
n
20
G
609
F
U
610
n
21
U
610
F
C
611
n
22
C
611
F
G
612
n
23
G
612
F
A
613
n
24
A
613
F
A
614
n
25
A
614
F
n
26
615
F
n
1
686
G
G
687
n
2
G
687
G
U
688
n
3
U
688
G
U
689
n
4
U
689
G
C
690
n
5
C
690
G
G
691
n
6
G
691
G
A
692
n
7
A
692
G
C
693
n
8
C
693
G
G
694
n
9
G
694
G
A
695
n
10
A
695
G
G
696
n
11
G
696
G
A
697
n
12
A
697
G
G
698
n
13
G
698
G
A
699
n
14
A
699
G
G
700
n
15
G
700
G
A
701
n
16
A
701
G
G
804
n
1
G
804
H
G
805
n
2
G
805
H
n
3
806
H
n
4
807
H
n
5
808
H
n
6
809
H
n
7
810
H
n
8
811
H
n
9
812
H
n
10
813
H
n
11
814
H
G
804
n
1
G
804
D
G
805
n
2
G
805
D
n
3
806
D
n
4
807
D
n
5
808
D
n
6
809
D
n
7
810
D
n
8
811
D
n
9
812
D
n
10
813
D
n
11
814
D
author_defined_assembly
4
tetrameric
author_defined_assembly
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLN
4
A
N
GLN
4
A
O
CYS
281
A
O
CYS
281
A
O
VAL
282
A
O
VAL
282
A
N
SER
271
A
N
SER
271
A
O
LEU
274
A
O
LEU
274
A
N
THR
156
A
N
THR
156
A
N
TYR
157
A
N
TYR
157
A
O
ILE
176
A
O
ILE
176
A
N
GLU
26
A
N
GLU
26
A
O
THR
404
A
O
THR
404
A
N
GLU
39
A
N
GLU
39
A
O
ARG
163
A
O
ARG
163
A
N
LYS
228
A
N
LYS
228
A
O
TYR
334
A
O
TYR
334
A
O
ASP
329
A
O
ASP
329
A
N
TYR
326
A
N
TYR
326
A
N
ASP
233
A
N
ASP
233
A
O
THR
355
A
O
THR
355
A
N
PHE
373
A
N
PHE
373
A
O
ARG
376
A
O
ARG
376
A
N
PHE
377
A
N
PHE
377
A
O
VAL
391
A
O
VAL
391
E
N
GLN
4
D
N
GLN
4
E
O
CYS
281
D
O
CYS
281
E
O
TYR
280
D
O
TYR
280
E
N
HIS
273
D
N
HIS
273
E
O
LEU
274
D
O
LEU
274
E
N
LEU
154
D
N
LEU
154
E
N
TYR
157
D
N
TYR
157
E
O
ILE
176
D
O
ILE
176
E
N
GLU
26
D
N
GLU
26
E
O
THR
404
D
O
THR
404
E
N
GLU
39
D
N
GLU
39
E
O
ARG
163
D
O
ARG
163
E
N
PHE
230
D
N
PHE
230
E
O
ALA
332
D
O
ALA
332
E
O
ASP
329
D
O
ASP
329
E
N
TYR
326
D
N
TYR
326
E
N
ASP
233
D
N
ASP
233
E
O
THR
355
D
O
THR
355
E
N
PHE
377
D
N
PHE
377
E
O
VAL
391
D
O
VAL
391
1
A
SER
463
A
SER
463
1
Y
1
A
SER
464
A
SER
464
1
Y
1
A
SER
465
A
SER
465
1
Y
1
A
HIS
466
A
HIS
466
1
Y
1
A
HIS
467
A
HIS
467
1
Y
1
A
HIS
468
A
HIS
468
1
Y
1
A
HIS
469
A
HIS
469
1
Y
1
A
HIS
470
A
HIS
470
1
Y
1
A
HIS
471
A
HIS
471
1
Y
1
B
A
590
B
A
1
1
Y
1
B
A
591
B
A
2
1
Y
1
B
G
592
B
G
3
1
Y
1
B
U
593
B
U
4
1
Y
1
B
C
594
B
C
5
1
Y
1
B
U
595
B
U
6
1
Y
1
B
A
615
B
A
26
1
Y
1
C
U
686
C
U
1
1
Y
1
E
SER
463
D
SER
463
1
Y
1
E
SER
464
D
SER
464
1
Y
1
E
SER
465
D
SER
465
1
Y
1
E
HIS
466
D
HIS
466
1
Y
1
E
HIS
467
D
HIS
467
1
Y
1
E
HIS
468
D
HIS
468
1
Y
1
E
HIS
469
D
HIS
469
1
Y
1
E
HIS
470
D
HIS
470
1
Y
1
E
HIS
471
D
HIS
471
1
Y
1
F
A
590
E
A
1
1
Y
1
F
A
591
E
A
2
1
Y
1
F
G
592
E
G
3
1
Y
1
F
U
593
E
U
4
1
Y
1
F
C
594
E
C
5
1
Y
1
F
U
595
E
U
6
1
Y
1
F
A
615
E
A
26
1
Y
1
G
U
686
F
U
1
1
Y
1
H
G
806
G
G
3
1
Y
1
H
G
807
G
G
4
1
Y
1
H
G
808
G
G
5
1
Y
1
H
A
809
G
A
6
1
Y
1
H
G
810
G
G
7
1
Y
1
H
A
811
G
A
8
1
Y
1
H
U
812
G
U
9
1
Y
1
H
G
813
G
G
10
1
Y
1
H
A
814
G
A
11
1
Y
1
D
G
806
H
G
3
1
Y
1
D
G
807
H
G
4
1
Y
1
D
G
808
H
G
5
1
Y
1
D
A
809
H
A
6
1
Y
1
D
G
810
H
G
7
1
Y
1
D
A
811
H
A
8
1
Y
1
D
U
812
H
U
9
1
Y
1
D
G
813
H
G
10
1
Y
1
D
A
814
H
A
11
1
Y
1
G
G
O
O
HOH
HOH
801
806
2.04
1
E
G
O
O2'
TYR
A
326
701
2.15
1
A
C
O
O2'
TYR
A
326
701
2.18
1
E
E
O
OG
ALA
SER
57
60
2.19
1
7.67
1.10
114.20
121.87
A
A
A
CA
CB
SG
CYS
CYS
CYS
212
212
212
N
1
-3.16
0.40
121.90
118.74
B
B
B
N3
C4
C5
C
C
C
606
606
606
N
1
-6.05
0.90
105.70
99.65
C
C
C
O5'
P
OP2
A
A
A
697
697
697
N
1
-2.59
0.40
121.90
119.31
F
F
F
N3
C4
C5
C
C
C
606
606
606
N
1
4.36
0.70
118.00
122.36
F
F
F
N3
C4
N4
C
C
C
606
606
606
N
1
A
ALA
29
-58.89
-9.78
1
A
VAL
33
-62.63
-85.77
1
A
LYS
66
-134.39
-50.06
1
A
THR
68
-143.57
-27.72
1
A
ASP
89
55.71
77.48
1
A
ALA
100
-47.64
-18.07
1
A
ASP
105
-58.86
94.92
1
A
THR
138
-73.54
-89.85
1
A
LYS
139
27.13
-79.01
1
A
SER
164
-58.22
172.48
1
A
GLU
227
-63.76
-95.23
1
A
LYS
276
62.39
-108.44
1
A
LYS
314
-51.77
109.35
1
A
GLN
345
-61.09
-80.58
1
A
SER
346
-59.80
72.74
1
A
LYS
359
40.86
29.82
1
A
PHE
363
-68.07
96.10
1
A
TRP
368
-62.50
5.60
1
E
VAL
33
-62.14
-82.36
1
E
PHE
54
-67.43
-70.30
1
E
LYS
66
-136.77
-50.90
1
E
THR
68
-144.65
-26.68
1
E
ASP
89
55.18
77.78
1
E
ALA
100
-48.80
-17.76
1
E
ASP
105
-62.92
98.26
1
E
LEU
112
-78.73
20.14
1
E
THR
138
-74.09
-81.99
1
E
LYS
139
17.78
-73.35
1
E
SER
173
-68.20
-173.93
1
E
GLU
227
-65.48
-96.11
1
E
LYS
276
63.62
-107.75
1
E
LYS
314
-51.69
109.84
1
E
GLN
345
-60.31
-82.54
1
E
SER
346
-62.43
69.79
1
E
ASP
358
64.46
61.49
1
E
LYS
359
40.83
28.63
1
E
PHE
363
-69.28
99.83
1
E
TRP
368
-62.97
5.90
1
E
TYR
384
-150.77
77.09
223.580
96.6887
57.010
0.2757
0.2186
0.2216
2.8500
43.2630
1743
34099
5.1100
98.0500
1.000
1.000
0.7091
0.4200
1
1.970
MOLECULAR REPLACEMENT
34.8300
0.9000
1.1100
ML
FLAT BULK SOLVENT MODEL
2.8500
43.2630
57
9027
20
1544
7406
0.009
9324
1.253
12954
0.049
1470
0.007
1376
16.781
3674
0.3788
0.3582
2.9338
150
2692
2842
12
98.0000
0.3775
0.3233
3.0285
144
2701
2845
12
98.0000
0.3778
0.2982
3.1367
145
2644
2789
12
98.0000
0.3164
0.2815
3.2623
136
2699
2835
12
98.0000
0.3807
0.2778
3.4107
140
2742
2882
12
98.0000
0.3532
0.2803
3.5904
139
2713
2852
12
98.0000
0.3945
0.2934
3.8153
149
2688
2837
12
98.0000
0.2760
0.2134
4.1096
147
2659
2806
12
98.0000
0.2195
0.1753
4.5228
145
2754
2899
12
98.0000
0.2394
0.1697
5.1763
146
2688
2834
12
98.0000
0.2726
0.1925
6.5181
161
2723
2884
12
99.0000
0.2112
0.1925
43.2675
141
2653
2794
12
97.0000
2.850
45.690
4K4U
34198
2
1.5
0.047
1.170
1
9.000
2.010
520
98.300
0.442
2.850
2.950
1.800
6893
3403
1.300
1
2.020
98.100
0.346
2.950
3.070
2.300
6900
3414
1.270
1
2.010
98.200
0.276
3.070
3.210
2.700
6955
3443
1.210
1
2.010
98.400
0.211
3.210
3.380
3.800
6831
3392
1.230
1
2.000
98.500
0.180
3.380
3.590
4.000
7004
3458
1.190
1
2.020
98.500
0.148
3.590
3.870
5.300
6908
3400
1.220
1
2.020
98.600
0.083
3.870
4.260
9.400
7017
3469
1.130
1
2.000
98.500
0.059
4.260
4.870
13.000
6900
3402
0.980
1
2.000
98.400
0.051
4.870
6.140
16.600
6960
3423
1.030
1
2.010
98.600
0.029
6.140
45.690
30.900
6922
3394
1.130
1
2.010
97.400
data scaling
Jim W. Pflugrath
Jim.Pflugrath@Rigaku.com
http://www.rigaku.com/software/dtrek.html
d*TREK
package
data reduction
Jim W. Pflugrath
Jim.Pflugrath@Rigaku.com
Jul 22 2011
http://www.rigaku.com/software/dtrek.html
d*TREK
package
9.9.9.4D
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.8.2_1309
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
Blu-Ice
phasing
PHENIX
Poliovirus polymerase elongation complex (r5_form)
1
N
N
2
N
N
3
N
N
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
A
LYS
10
A
LYS
10
HELX_P
A
VAL
12
A
VAL
12
5
1
3
A
ASP
53
A
ASP
53
HELX_P
A
PHE
59
A
PHE
59
1
2
7
A
ASP
71
A
ASP
71
HELX_P
A
MET
86
A
MET
86
1
3
16
A
SER
87
A
SER
87
HELX_P
A
ASP
89
A
ASP
89
5
4
3
A
CYS
96
A
CYS
96
HELX_P
A
GLY
103
A
GLY
103
1
5
8
A
PRO
119
A
PRO
119
HELX_P
A
GLY
124
A
GLY
124
1
6
6
A
LYS
126
A
LYS
126
HELX_P
A
ILE
130
A
ILE
130
5
7
5
A
LYS
139
A
LYS
139
HELX_P
A
GLY
149
A
GLY
149
1
8
11
A
SER
164
A
SER
164
HELX_P
A
GLU
169
A
GLU
169
1
9
6
A
SER
180
A
SER
180
HELX_P
A
GLY
192
A
GLY
192
1
10
13
A
LEU
194
A
LEU
194
HELX_P
A
LYS
200
A
LYS
200
1
11
7
A
ASP
213
A
ASP
213
HELX_P
A
MET
225
A
MET
225
1
12
13
A
GLY
236
A
GLY
236
HELX_P
A
LEU
241
A
LEU
241
1
13
6
A
SER
242
A
SER
242
HELX_P
A
ILE
256
A
ILE
256
1
14
15
A
ASP
260
A
ASP
260
HELX_P
A
TYR
264
A
TYR
264
5
15
5
A
ILE
265
A
ILE
265
HELX_P
A
ASN
269
A
ASN
269
1
16
5
A
GLY
292
A
GLY
292
HELX_P
A
TYR
313
A
TYR
313
1
17
22
A
ASP
317
A
ASP
317
HELX_P
A
LEU
321
A
LEU
321
5
18
5
A
ASP
339
A
ASP
339
HELX_P
A
SER
346
A
SER
346
1
19
8
A
GLY
347
A
GLY
347
HELX_P
A
GLY
351
A
GLY
351
5
20
5
A
PRO
393
A
PRO
393
HELX_P
A
ARG
402
A
ARG
402
1
21
10
A
ASP
406
A
ASP
406
HELX_P
A
ARG
408
A
ARG
408
5
22
3
A
ASN
409
A
ASN
409
HELX_P
A
TRP
422
A
TRP
422
1
23
14
A
GLY
425
A
GLY
425
HELX_P
A
ARG
437
A
ARG
437
1
24
13
A
VAL
439
A
VAL
439
HELX_P
A
LEU
445
A
LEU
445
1
25
7
A
GLU
449
A
GLU
449
HELX_P
A
SER
460
A
SER
460
1
26
12
E
LYS
10
D
LYS
10
HELX_P
E
VAL
12
D
VAL
12
5
27
3
E
ASP
53
D
ASP
53
HELX_P
E
PHE
59
D
PHE
59
1
28
7
E
ASP
71
D
ASP
71
HELX_P
E
MET
86
D
MET
86
1
29
16
E
SER
87
D
SER
87
HELX_P
E
ASP
89
D
ASP
89
5
30
3
E
CYS
96
D
CYS
96
HELX_P
E
GLY
103
D
GLY
103
1
31
8
E
PRO
119
D
PRO
119
HELX_P
E
GLY
124
D
GLY
124
1
32
6
E
LYS
126
D
LYS
126
HELX_P
E
ILE
130
D
ILE
130
5
33
5
E
LYS
139
D
LYS
139
HELX_P
E
GLY
149
D
GLY
149
1
34
11
E
LYS
165
D
LYS
165
HELX_P
E
GLN
170
D
GLN
170
1
35
6
E
SER
180
D
SER
180
HELX_P
E
GLY
192
D
GLY
192
1
36
13
E
LEU
194
D
LEU
194
HELX_P
E
LYS
200
D
LYS
200
1
37
7
E
ASP
213
D
ASP
213
HELX_P
E
TRP
218
D
TRP
218
1
38
6
E
SER
219
D
SER
219
HELX_P
E
MET
225
D
MET
225
1
39
7
E
GLY
236
D
GLY
236
HELX_P
E
LEU
241
D
LEU
241
1
40
6
E
SER
242
D
SER
242
HELX_P
E
ILE
256
D
ILE
256
1
41
15
E
GLY
257
D
GLY
257
HELX_P
E
TYR
264
D
TYR
264
5
42
8
E
ILE
265
D
ILE
265
HELX_P
E
ASN
269
D
ASN
269
1
43
5
E
GLY
292
D
GLY
292
HELX_P
E
TYR
313
D
TYR
313
1
44
22
E
ASP
317
D
ASP
317
HELX_P
E
LEU
321
D
LEU
321
5
45
5
E
ASP
339
D
ASP
339
HELX_P
E
SER
346
D
SER
346
1
46
8
E
GLY
347
D
GLY
347
HELX_P
E
GLY
351
D
GLY
351
5
47
5
E
PRO
393
D
PRO
393
HELX_P
E
ARG
402
D
ARG
402
1
48
10
E
ASP
406
D
ASP
406
HELX_P
E
ARG
408
D
ARG
408
5
49
3
E
ASN
409
D
ASN
409
HELX_P
E
TRP
422
D
TRP
422
1
50
14
E
GLY
425
D
GLY
425
HELX_P
E
ARG
437
D
ARG
437
1
51
13
E
VAL
439
D
VAL
439
HELX_P
E
LEU
445
D
LEU
445
1
52
7
E
GLU
449
D
GLU
449
HELX_P
E
SER
460
D
SER
460
1
53
12
hydrog
C-G PAIR
B
C
596
B
N4
C
7
1_555
D
G
805
H
O6
G
2
1_555
hydrog
C-G PAIR
B
C
597
B
O2
C
8
1_555
D
G
805
H
N1
G
2
1_555
hydrog
U-A PAIR
B
U
601
B
N3
U
12
1_555
C
A
701
C
N1
A
16
1_555
hydrog
WATSON-CRICK
B
C
602
B
N3
C
13
1_555
C
G
700
C
N1
G
15
1_555
hydrog
WATSON-CRICK
B
C
602
B
N4
C
13
1_555
C
G
700
C
O6
G
15
1_555
hydrog
WATSON-CRICK
B
C
602
B
O2
C
13
1_555
C
G
700
C
N2
G
15
1_555
hydrog
WATSON-CRICK
B
U
603
B
N3
U
14
1_555
C
A
699
C
N1
A
14
1_555
hydrog
WATSON-CRICK
B
U
603
B
O4
U
14
1_555
C
A
699
C
N6
A
14
1_555
hydrog
WATSON-CRICK
B
C
604
B
N3
C
15
1_555
C
G
698
C
N1
G
13
1_555
hydrog
WATSON-CRICK
B
C
604
B
N4
C
15
1_555
C
G
698
C
O6
G
13
1_555
hydrog
WATSON-CRICK
B
C
604
B
O2
C
15
1_555
C
G
698
C
N2
G
13
1_555
hydrog
WATSON-CRICK
B
U
605
B
N3
U
16
1_555
C
A
697
C
N1
A
12
1_555
hydrog
WATSON-CRICK
B
U
605
B
O4
U
16
1_555
C
A
697
C
N6
A
12
1_555
hydrog
WATSON-CRICK
B
C
606
B
N3
C
17
1_555
C
G
696
C
N1
G
11
1_555
hydrog
WATSON-CRICK
B
C
606
B
N4
C
17
1_555
C
G
696
C
O6
G
11
1_555
hydrog
WATSON-CRICK
B
C
606
B
O2
C
17
1_555
C
G
696
C
N2
G
11
1_555
hydrog
WATSON-CRICK
B
U
607
B
N3
U
18
1_555
C
A
695
C
N1
A
10
1_555
hydrog
WATSON-CRICK
B
U
607
B
O4
U
18
1_555
C
A
695
C
N6
A
10
1_555
hydrog
WATSON-CRICK
B
C
608
B
N3
C
19
1_555
C
G
694
C
N1
G
9
1_555
hydrog
WATSON-CRICK
B
C
608
B
N4
C
19
1_555
C
G
694
C
O6
G
9
1_555
hydrog
WATSON-CRICK
B
C
608
B
O2
C
19
1_555
C
G
694
C
N2
G
9
1_555
hydrog
G-C PAIR
B
G
609
B
N1
G
20
1_555
C
C
693
C
N3
C
8
1_555
hydrog
WATSON-CRICK
B
U
610
B
N3
U
21
1_555
C
A
692
C
N1
A
7
1_555
hydrog
WATSON-CRICK
B
U
610
B
O4
U
21
1_555
C
A
692
C
N6
A
7
1_555
hydrog
WATSON-CRICK
B
C
611
B
N3
C
22
1_555
C
G
691
C
N1
G
6
1_555
hydrog
WATSON-CRICK
B
C
611
B
N4
C
22
1_555
C
G
691
C
O6
G
6
1_555
hydrog
WATSON-CRICK
B
C
611
B
O2
C
22
1_555
C
G
691
C
N2
G
6
1_555
hydrog
WATSON-CRICK
B
G
612
B
N1
G
23
1_555
C
C
690
C
N3
C
5
1_555
hydrog
WATSON-CRICK
B
G
612
B
N2
G
23
1_555
C
C
690
C
O2
C
5
1_555
hydrog
WATSON-CRICK
B
G
612
B
O6
G
23
1_555
C
C
690
C
N4
C
5
1_555
hydrog
WATSON-CRICK
B
A
613
B
N1
A
24
1_555
C
U
689
C
N3
U
4
1_555
hydrog
WATSON-CRICK
B
A
613
B
N6
A
24
1_555
C
U
689
C
O4
U
4
1_555
hydrog
C-G PAIR
F
C
596
E
N4
C
7
1_555
H
G
805
G
O6
G
2
1_555
hydrog
C-G PAIR
F
C
597
E
O2
C
8
1_555
H
G
805
G
N1
G
2
1_555
hydrog
U-A PAIR
F
U
601
E
N3
U
12
1_555
G
A
701
F
N1
A
16
1_555
hydrog
WATSON-CRICK
F
C
602
E
N3
C
13
1_555
G
G
700
F
N1
G
15
1_555
hydrog
WATSON-CRICK
F
C
602
E
N4
C
13
1_555
G
G
700
F
O6
G
15
1_555
hydrog
WATSON-CRICK
F
C
602
E
O2
C
13
1_555
G
G
700
F
N2
G
15
1_555
hydrog
WATSON-CRICK
F
U
603
E
N3
U
14
1_555
G
A
699
F
N1
A
14
1_555
hydrog
WATSON-CRICK
F
U
603
E
O4
U
14
1_555
G
A
699
F
N6
A
14
1_555
hydrog
WATSON-CRICK
F
C
604
E
N3
C
15
1_555
G
G
698
F
N1
G
13
1_555
hydrog
WATSON-CRICK
F
C
604
E
N4
C
15
1_555
G
G
698
F
O6
G
13
1_555
hydrog
WATSON-CRICK
F
C
604
E
O2
C
15
1_555
G
G
698
F
N2
G
13
1_555
hydrog
WATSON-CRICK
F
U
605
E
N3
U
16
1_555
G
A
697
F
N1
A
12
1_555
hydrog
WATSON-CRICK
F
U
605
E
O4
U
16
1_555
G
A
697
F
N6
A
12
1_555
hydrog
WATSON-CRICK
F
C
606
E
N3
C
17
1_555
G
G
696
F
N1
G
11
1_555
hydrog
WATSON-CRICK
F
C
606
E
N4
C
17
1_555
G
G
696
F
O6
G
11
1_555
hydrog
WATSON-CRICK
F
C
606
E
O2
C
17
1_555
G
G
696
F
N2
G
11
1_555
hydrog
WATSON-CRICK
F
U
607
E
N3
U
18
1_555
G
A
695
F
N1
A
10
1_555
hydrog
WATSON-CRICK
F
U
607
E
O4
U
18
1_555
G
A
695
F
N6
A
10
1_555
hydrog
WATSON-CRICK
F
C
608
E
N3
C
19
1_555
G
G
694
F
N1
G
9
1_555
hydrog
WATSON-CRICK
F
C
608
E
N4
C
19
1_555
G
G
694
F
O6
G
9
1_555
hydrog
WATSON-CRICK
F
C
608
E
O2
C
19
1_555
G
G
694
F
N2
G
9
1_555
hydrog
WATSON-CRICK
F
G
609
E
N1
G
20
1_555
G
C
693
F
N3
C
8
1_555
hydrog
WATSON-CRICK
F
G
609
E
N2
G
20
1_555
G
C
693
F
O2
C
8
1_555
hydrog
WATSON-CRICK
F
G
609
E
O6
G
20
1_555
G
C
693
F
N4
C
8
1_555
hydrog
WATSON-CRICK
F
U
610
E
N3
U
21
1_555
G
A
692
F
N1
A
7
1_555
hydrog
WATSON-CRICK
F
U
610
E
O4
U
21
1_555
G
A
692
F
N6
A
7
1_555
hydrog
WATSON-CRICK
F
C
611
E
N3
C
22
1_555
G
G
691
F
N1
G
6
1_555
hydrog
WATSON-CRICK
F
C
611
E
N4
C
22
1_555
G
G
691
F
O6
G
6
1_555
hydrog
WATSON-CRICK
F
C
611
E
O2
C
22
1_555
G
G
691
F
N2
G
6
1_555
hydrog
WATSON-CRICK
F
G
612
E
N1
G
23
1_555
G
C
690
F
N3
C
5
1_555
hydrog
WATSON-CRICK
F
G
612
E
N2
G
23
1_555
G
C
690
F
O2
C
5
1_555
hydrog
WATSON-CRICK
F
G
612
E
O6
G
23
1_555
G
C
690
F
N4
C
5
1_555
hydrog
WATSON-CRICK
F
A
613
E
N1
A
24
1_555
G
U
689
F
N3
U
4
1_555
hydrog
WATSON-CRICK
F
A
613
E
N6
A
24
1_555
G
U
689
F
O4
U
4
1_555
Transferase/rna
polymerase, RNA-dependent RNA polymerase, protein-RNA complex, Transferase-rna complex
A
TYR
118
A
TYR
118
1
A
PRO
119
A
PRO
119
2.10
E
TYR
118
D
TYR
118
1
E
PRO
119
D
PRO
119
1.20
POLG_POL1M
UNP
1
1749
P03300
GEIQWMRPSKEVGYPIINAPSKTKLEPSAFHYVFEGVKEPAVLTKNDPRLKTDFEEAIFSKYVGNKITEVDEYMKEAVDH
YAGQLMSLDINTEQMCLEDAMYGTDGLEALDLSTSAGYPYVAMGKKKRDILNKQTRDTKEMQKLLDTYGINLPLVTYVKD
ELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWSKIPVLMEEKLFAFDYTGYDAS
LSPAWFEALKMVLEKIGFGDRVDYIDYLNHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTYKGIDLDH
LKMIAYGDDVIASYPHEVDASLLAQSGKDYGLTMTPADKSATFETVTWENVTFLKRFFRADEKYPFLIHPVMPMKEIHES
IRWTKDPRNTQDHVRSLCLLAWHNGEEEYNKFLAKIRSVPIGRALLLPEYSTLYRRWLDSF
4K4U
PDB
2
4K4U
4K4U
PDB
3
4K4U
4K4U
PDB
4
4K4U
1749
2209
4K4U
1
461
P03300
A
1
1
461
1749
2209
4K4U
1
461
P03300
E
1
1
461
590
615
4K4U
590
615
4K4U
B
2
1
26
590
615
4K4U
590
615
4K4U
F
2
1
26
686
701
4K4U
686
701
4K4U
C
3
1
16
686
701
4K4U
686
701
4K4U
G
3
1
16
804
814
4K4U
804
814
4K4U
H
4
1
11
804
814
4K4U
804
814
4K4U
D
4
1
11
1
CYS
engineered mutation
MET
290
4K4U
A
P03300
UNP
2038
290
1
LEU
engineered mutation
ASP
446
4K4U
A
P03300
UNP
2194
446
1
expression tag
GLY
462
4K4U
A
P03300
UNP
462
1
expression tag
SER
463
4K4U
A
P03300
UNP
463
1
expression tag
SER
464
4K4U
A
P03300
UNP
464
1
expression tag
SER
465
4K4U
A
P03300
UNP
465
1
expression tag
HIS
466
4K4U
A
P03300
UNP
466
1
expression tag
HIS
467
4K4U
A
P03300
UNP
467
1
expression tag
HIS
468
4K4U
A
P03300
UNP
468
1
expression tag
HIS
469
4K4U
A
P03300
UNP
469
1
expression tag
HIS
470
4K4U
A
P03300
UNP
470
1
expression tag
HIS
471
4K4U
A
P03300
UNP
471
2
CYS
engineered mutation
MET
290
4K4U
E
P03300
UNP
2038
290
2
LEU
engineered mutation
ASP
446
4K4U
E
P03300
UNP
2194
446
2
expression tag
GLY
462
4K4U
E
P03300
UNP
462
2
expression tag
SER
463
4K4U
E
P03300
UNP
463
2
expression tag
SER
464
4K4U
E
P03300
UNP
464
2
expression tag
SER
465
4K4U
E
P03300
UNP
465
2
expression tag
HIS
466
4K4U
E
P03300
UNP
466
2
expression tag
HIS
467
4K4U
E
P03300
UNP
467
2
expression tag
HIS
468
4K4U
E
P03300
UNP
468
2
expression tag
HIS
469
4K4U
E
P03300
UNP
469
2
expression tag
HIS
470
4K4U
E
P03300
UNP
470
2
expression tag
HIS
471
4K4U
E
P03300
UNP
471
5
2
2
3
2
3
5
2
2
3
2
2
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
2
A
GLU
2
A
PRO
8
A
PRO
8
A
LYS
278
A
LYS
278
A
LYS
283
A
LYS
283
A
HIS
270
A
HIS
270
A
TYR
275
A
TYR
275
A
LEU
154
A
LEU
154
A
VAL
158
A
VAL
158
A
LEU
175
A
LEU
175
A
ALA
178
A
ALA
178
A
GLU
26
A
GLU
26
A
PRO
27
A
PRO
27
A
TRP
403
A
TRP
403
A
THR
404
A
THR
404
A
GLU
39
A
GLU
39
A
PRO
40
A
PRO
40
A
LEU
162
A
LEU
162
A
ARG
163
A
ARG
163
A
LYS
228
A
LYS
228
A
PHE
230
A
PHE
230
A
ASP
329
A
ASP
329
A
TYR
334
A
TYR
334
A
LYS
322
A
LYS
322
A
TYR
326
A
TYR
326
A
PHE
232
A
PHE
232
A
TYR
234
A
TYR
234
A
MET
354
A
MET
354
A
PRO
356
A
PRO
356
A
THR
372
A
THR
372
A
PHE
373
A
PHE
373
A
ARG
376
A
ARG
376
A
ALA
380
A
ALA
380
A
ILE
388
A
ILE
388
A
VAL
391
A
VAL
391
E
GLU
2
D
GLU
2
E
PRO
8
D
PRO
8
E
LYS
278
D
LYS
278
E
LYS
283
D
LYS
283
E
HIS
270
D
HIS
270
E
TYR
275
D
TYR
275
E
LEU
154
D
LEU
154
E
VAL
158
D
VAL
158
E
LEU
175
D
LEU
175
E
ALA
178
D
ALA
178
E
GLU
26
D
GLU
26
E
PRO
27
D
PRO
27
E
TRP
403
D
TRP
403
E
THR
404
D
THR
404
E
GLU
39
D
GLU
39
E
PRO
40
D
PRO
40
E
LEU
162
D
LEU
162
E
ARG
163
D
ARG
163
E
LYS
228
D
LYS
228
E
PHE
230
D
PHE
230
E
ASP
329
D
ASP
329
E
TYR
334
D
TYR
334
E
LYS
322
D
LYS
322
E
TYR
326
D
TYR
326
E
PHE
232
D
PHE
232
E
TYR
234
D
TYR
234
E
MET
354
D
MET
354
E
PRO
356
D
PRO
356
E
PHE
377
D
PHE
377
E
ALA
380
D
ALA
380
E
ILE
388
D
ILE
388
E
VAL
391
D
VAL
391
BINDING SITE FOR RESIDUE SO4 A 501
A
SO4
501
Software
5
BINDING SITE FOR RESIDUE SO4 A 502
A
SO4
502
Software
1
BINDING SITE FOR RESIDUE SO4 E 501
E
SO4
501
Software
5
BINDING SITE FOR RESIDUE SO4 E 502
E
SO4
502
Software
1
A
LYS
38
A
LYS
38
5
1_555
A
SER
164
A
SER
164
5
1_555
A
LYS
167
A
LYS
167
5
1_555
A
LYS
359
A
LYS
359
5
1_555
A
HOH
607
M
HOH
5
1_555
A
ARG
163
A
ARG
163
1
1_555
E
LYS
38
D
LYS
38
5
1_555
E
ARG
163
D
ARG
163
5
1_555
E
SER
164
D
SER
164
5
1_555
E
LYS
167
D
LYS
167
5
1_555
E
LYS
359
D
LYS
359
5
1_555
E
ARG
163
D
ARG
163
1
1_555
1
P 1